A5V646 (A5V646_SPHWW) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Coproporphyrinogen oxidase EMBL ABQ67762.1
EC=1.3.3.3 EMBL ABQ67762.1

Gene names

Ordered Locus Names:

Swit_1398

Organism

Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) [Complete proteome] [HAMAP]

Taxonomic identifier

392499 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Sphingomonadales › Sphingomonadaceae › Sphingomonas

Protein attributes

Sequence length	286 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Key enzyme in heme biosynthesis. Catalyzes the oxidative decarboxylation of propionic acid side chains of rings A and B of coproporphyrinogen III By similarity. SAAS SAAS001260
Catalytic activity	Coproporphyrinogen-III + O2 + 2 H+ = protoporphyrinogen-IX + 2 CO2 + 2 H2O. SAAS SAAS001260
Pathway	Porphyrin metabolism; protoporphyrin-IX biosynthesis; protoporphyrinogen-IX from coproporphyrinogen-III (O2 route): step 1/1. SAAS SAAS001260
Subunit structure	Homodimer By similarity. SAAS SAAS001260

Ontologies

Keywords
Biological process	Porphyrin biosynthesis SAAS SAAS001260
Molecular function	Oxidoreductase SAAS SAAS001260 EMBL ABQ67762.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	porphyrin-containing compound biosynthetic process Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	coproporphyrinogen oxidase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A5V646 [UniParc]. Last modified July 10, 2007. Version 1. Checksum: E1736E28EBA895BB	FASTA	286	31,641
	10 20 30 40 50 60 MTLQLDAQQT AARAWFESLR DRICAAFEAI EAEAGSDARF GYTPWNRDDD PAGAGGGGVR 70 80 90 100 110 120 GLMKGRVFEK VGVNVSTVGG AFQPEFAKTI HGAGEDNPGF FATGISLVAH MASPHVPAVH 130 140 150 160 170 180 MNTRFLTTTK RWFGGGADLN PPIPYDADTD AFHARLKAAC DPHGADYYDR FKAWADDYFW 190 200 210 220 230 240 IPHRQVHRGV GGIFYDHLDV EDDAGFDAHF AFTRDVGEAF LDIFPKIVRA RMDQPASAED 250 260 270 280 RRRMLNFRGR YAEFNLVYDR GTLFGLKTGG NIDAILMSLP PEATWE

References

[1]

"Complete sequence of chromosome of Sphingomonas wittichii RW1." Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Saunders E., Brettin T., Bruce D., Detter J.C., Han C., Tapia R., Gilna P., Schmutz J., Larimer F., Land M. , Hauser L., Kyrpides N., Kim E., Halden R.U., Miller T.R., Salzberg S.L., Eisen J.A., Richardson P. Submitted (MAY-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: RW1 / DSM 6014 / JCM 10273.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000699 Genomic DNA. Translation: ABQ67762.1.
RefSeq	YP_001261900.1. NC_009511.1.
3D structure databases
ProteinModelPortal	A5V646.
ModBase	Search...
Protein-protein interaction databases
STRING	A5V646.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5198097.
GenomeReviews	Gene locus Swit_1398 in contig CP000699_GR.
KEGG	swi:Swit_1398.
NMPDR	fig|392499.4.peg.1679.
PATRIC	23681868. VBISphWit55028_1894.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0408.
HOGENOM	HBG631180.
OMA	ARICAEL.
ProtClustDB	PRK05330.
Family and domain databases
InterPro	IPR001260. Coprogen_oxidase_aer. [Graphical view]
Gene3D	G3DSA:3.40.1500.10. Coprogen_oxidas. 1 hit.
KO	K00228.
PANTHER	PTHR10755. Coprogen_oxidas. 1 hit.
Pfam	PF01218. Coprogen_oxidas. 1 hit. [Graphical view]
PIRSF	PIRSF000166. Coproporphyri_ox. 1 hit.
PRINTS	PR00073. COPRGNOXDASE.
SUPFAM	SSF102886. Coprogen_oxidas. 1 hit.
ProtoNet	Search...

Entry information

Entry name

A5V646_SPHWW

Accession

Primary (citable) accession number: A5V646

Entry history

Integrated into UniProtKB/TrEMBL:	July 10, 2007
Last sequence update:	July 10, 2007
Last modified:	December 14, 2011
This is version 36 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)