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A5V5N4 (A5V5N4_SPHWW) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 37. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Swit_1235 EMBL ABQ67600.1
OrganismSphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) [Complete proteome] [HAMAP] EMBL ABQ67600.1
Taxonomic identifier392499 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaSphingomonadalesSphingomonadaceaeSphingomonas

Protein attributes

Sequence length671 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existencePredicted

Ontologies

Keywords
   DomainSignal EMBL ABQ67600.1
   Technical termComplete proteome
Gene Ontology (GO)
   Molecular_functioncatalytic activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 2323 Potential EMBL ABQ67600.1
Chain24 – 671648 Potential EMBL ABQ67600.1
PRO_5000250611

Sequences

Sequence LengthMass (Da)Tools
A5V5N4 [UniParc].

Last modified July 10, 2007. Version 1.
Checksum: 70DD97D1C771EA0F

FASTA67170,778
        10         20         30         40         50         60 
MNRIRLAGLL VLAVAALLSA FAGEAMRRPL FDLWQRLAPR DLSGTPVHVV LVDSDSIAAV 

        70         80         90        100        110        120 
GPWPWPRYHM ARLTEEIAAR GPKAIGFDML FPEPDRVRPD IFAALYPELS PAAAAEVQAL 

       130        140        150        160        170        180 
PPMDRLYGQV VGKAPVVLGR AGVASGGTDP AQLFVDAAIK GALPPDLPDE PRAVANIPEL 

       190        200        210        220        230        240 
EGAALGHGLL NGQPDSDGRV RRVPLLMKLG GRAMPSLSLE LARLARDQEA VTAEARGVVL 

       250        260        270        280        290        300 
AGRRIPVDAE GRMRLRFGRF PAAEISSAAD VLRRKFPADA FAGKIVLLGL AAEGTADIVA 

       310        320        330        340        350        360 
TPLEAEGYGT LVQAQAVDAI LRGGWLDRPA WAAPAEWGVG LLLAVAVLLC GPARRRALML 

       370        380        390        400        410        420 
VPLGLAVAIA LAGWFAFDLG SLLLDPLRPL LLGGGAAVGV AGGMFVEARR ERERLRETLV 

       430        440        450        460        470        480 
RERIAAAATE GELQAARSIQ LGMLPPREEL AGFDPRIDID ALLEPAKSIG GDLYDVIRLD 

       490        500        510        520        530        540 
ADRIAFLVGD VTGKGVPAAL FMALSKALAK SVVLRGVPSL ADAAAILNEE LMRDNSEAMN 

       550        560        570        580        590        600 
VTMLVGILDL SSGELVLMSA GHEDPLHIRG DGAIAIHKLD GGPPFCIVDF PYPDEPMTLA 

       610        620        630        640        650        660 
PGEALVLISD GVSEAQNGDG ALFGHDRLLA ALQGRTNASA MVEAMRDAVR AFEDGTDPTD 

       670 
DLTVMAVRYL G 

« Hide

References

[1]"Complete sequence of chromosome of Sphingomonas wittichii RW1."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Saunders E., Brettin T., Bruce D., Detter J.C., Han C., Tapia R., Gilna P., Schmutz J., Larimer F., Land M. expand/collapse author list , Hauser L., Kyrpides N., Kim E., Halden R.U., Miller T.R., Salzberg S.L., Eisen J.A., Richardson P.
Submitted (MAY-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: RW1 / DSM 6014 / JCM 10273.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000699 Genomic DNA. Translation: ABQ67600.1.
RefSeqYP_001261738.1. NC_009511.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING392499.Swit_1235.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABQ67600; ABQ67600; Swit_1235.
GeneID5200952.
KEGGswi:Swit_1235.
PATRIC23681548. VBISphWit55028_1734.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG4252.
OMAPRAVANI.
OrthoDBEOG6JDW7F.
ProtClustDBCLSK839848.

Enzyme and pathway databases

BioCycSWIT392499:GHZK-1253-MONOMER.

Family and domain databases

InterProIPR007890. CHASE2.
IPR001932. PP2C-like_dom.
[Graphical view]
PfamPF05226. CHASE2. 1 hit.
PF07228. SpoIIE. 1 hit.
[Graphical view]
SMARTSM01080. CHASE2. 1 hit.
SM00331. PP2C_SIG. 1 hit.
[Graphical view]
SUPFAMSSF81606. SSF81606. 1 hit.
ProtoNetSearch...

Entry information

Entry nameA5V5N4_SPHWW
AccessionPrimary (citable) accession number: A5V5N4
Entry history
Integrated into UniProtKB/TrEMBL: July 10, 2007
Last sequence update: July 10, 2007
Last modified: April 16, 2014
This is version 37 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)