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A5V202 (A5V202_ROSS1) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 52. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Histidine--tRNA ligase HAMAP-Rule MF_00127
EC=6.1.1.21 HAMAP-Rule MF_00127
Alternative name(s):
Histidyl-tRNA synthetase HAMAP-Rule MF_00127
Gene names
Name:hisS HAMAP-Rule MF_00127
Ordered Locus Names:RoseRS_4574
OrganismRoseiflexus sp. (strain RS-1) [Complete proteome] [HAMAP] EMBL ABQ92905.1
Taxonomic identifier357808 [NCBI]
Taxonomic lineageBacteria › Chloroflexi › Chloroflexales › Chloroflexaceae › Roseiflexus

Protein attributes

Sequence length457 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + L-histidine + tRNA(His) = AMP + diphosphate + L-histidyl-tRNA(His). HAMAP-Rule MF_00127 SAAS SAAS015807

Subunit structure

Homodimer By similarity. HAMAP-Rule MF_00127

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_00127.

Sequence similarities

Belongs to the class-II aminoacyl-tRNA synthetase family. HAMAP-Rule MF_00127

Sequences

Sequence LengthMass (Da)Tools
A5V202 [UniParc].

Last modified July 10, 2007. Version 1.
Checksum: DEC88B1F10644C4D

FASTA45749,924
        10         20         30         40         50         60 
MSNRVQNIRG MRDHLPSAMI LRQYIIDTLT SVFERYGFEP LQTPVVEYAE TLDGKIGDDE 

        70         80         90        100        110        120 
KLIYRFEDHG GRKVALRYDQ TVPLARVVAQ YQGQLLFPWR RYAIGQSYRG ERPGRGRYRE 

       130        140        150        160        170        180 
LWQADIDIVG SASPLADAEI LAVLTDALTA LGFTGFTTLI SHRQILGGIA RVSGLDDAAA 

       190        200        210        220        230        240 
GDVYRAIDKL DKIGIDGVRN DLLQSGVSTA AAERILALID LQGDADEVLN ALAQQLQGDE 

       250        260        270        280        290        300 
RALQAIDNVR AIIGYARAMG VPEERIVIAP RLARGLSYYT GAVFESIVQN PPMGSLLGGG 

       310        320        330        340        350        360 
RYDELIGMFA GRSIPTVGLA FGIERLHDVM EELGMGPASR TIATAFVTLF NPDMAAESLR 

       370        380        390        400        410        420 
LAQELRRAGL LVETALDPSE KLGKQLQYAD RRGIPYALVI GPDELARGEV VVKDLRSGAQ 

       430        440        450 
QSVVRSAVAS QLRSAADARR TPRTAYDQGG THERQTS

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References

[1]"Complete sequence of Roseiflexus sp. RS-1."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chertkov O., Brettin T., Bruce D., Han C., Schmutz J., Larimer F., Land M. expand/collapse author list , Hauser L., Kyrpides N., Mikhailova N., Bryant D.A., Richardson P.
Submitted (APR-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: RS-1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000686 Genomic DNA. Translation: ABQ92905.1.
RefSeqYP_001278855.1. NC_009523.1.

3D structure databases

ProteinModelPortalA5V202.
ModBaseSearch...

Protein-protein interaction databases

STRING357808.RoseRS_4574.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABQ92905; ABQ92905; RoseRS_4574.
GeneID5211560.
KEGGrrs:RoseRS_4574.
PATRIC23358068. VBIRosSp109359_5060.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0124.
HOGENOMHOG000018071.
KOK01892.
OMARGERAQK.
ProtClustDBCLSK975418.

Enzyme and pathway databases

BioCycRSP357808:GH5Z-4627-MONOMER.

Family and domain databases

Gene3D3.40.50.800. 1 hit.
HAMAPMF_00125. HisZ.
MF_00127. His_tRNA_synth.
InterProIPR006195. aa-tRNA-synth_II.
IPR004154. Anticodon-bd.
IPR015807. His-tRNA-ligase.
IPR004516. HisRS/HisZ.
IPR004517. HisRS/HisZ_bac.
[Graphical view]
PANTHERPTHR11476. PTHR11476. 1 hit.
PfamPF03129. HGTP_anticodon. 1 hit.
[Graphical view]
PIRSFPIRSF001549. His-tRNA_synth. 1 hit.
SUPFAMSSF52954. Anticodon_bd. 1 hit.
TIGRFAMsTIGR00442. hisS. 1 hit.
PROSITEPS50862. AA_TRNA_LIGASE_II. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA5V202_ROSS1
AccessionPrimary (citable) accession number: A5V202
Entry history
Integrated into UniProtKB/TrEMBL: July 10, 2007
Last sequence update: July 10, 2007
Last modified: May 1, 2013
This is version 52 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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