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A5UTM2

- A5UTM2_ROSS1

UniProt

A5UTM2 - A5UTM2_ROSS1

Protein
Submitted name:

ATP dependent DNA ligase

Gene

RoseRS_1583

Organism
Roseiflexus sp. (strain RS-1)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 48 (01 Oct 2014)
      Sequence version 1 (10 Jul 2007)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA binding Source: InterPro
    3. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA recombination Source: InterPro
    2. DNA repair Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciRSP357808:GH5Z-1605-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    ATP dependent DNA ligaseImported
    Gene namesi
    Ordered Locus Names:RoseRS_1583Imported
    OrganismiRoseiflexus sp. (strain RS-1)Imported
    Taxonomic identifieri357808 [NCBI]
    Taxonomic lineageiBacteriaChloroflexiChloroflexiaChloroflexalesRoseiflexineaeRoseiflexaceaeRoseiflexus
    ProteomesiUP000006554: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi357808.RoseRS_1583.

    Structurei

    3D structure databases

    ProteinModelPortaliA5UTM2.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG1793.
    HOGENOMiHOG000036007.
    KOiK01971.
    OMAiRVWLWSR.
    OrthoDBiEOG6Q8HXT.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF04675. DNA_ligase_A_N. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
    PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    A5UTM2-1 [UniParc]FASTAAdd to Basket

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    METHIPVFMH TFAQLYATLD ETTRTSVKIE ALTRYFERSE PADAAWAIFF    50
    LIGRRVRQAV PLPTLRAWAV EAAGIPDWLF GECYDAVGDF AETVTLLLLE 100
    PDEWTVDVDR SVLPFEGPQP LHRWVEEVLL PLRDQDETMQ RAIVQAVWAT 150
    LGGTERFVWN KLITGAFRVG VSQQLVVRAL ARVSGVDSST IAHRLMGEWT 200
    PSETFYRTLL ARDTTDADVS RPYPFCLAHP LDADPETLGP IDEWQAEWKW 250
    DGIRSQLIRR AGRTFLWSRG EELITDRFPE IAAIGALLPD GIVIDGEVLP 300
    WKDGVVLPFA QLQRRIGRRN LTKAILDEAP VALLAYDLLE LNGVDVRNQP 350
    LERRRAELER LIATCVPGNQ ALLISPVVVA ADWDDLAAQW ATSRERNVEG 400
    LMLKRRSSPY RVGRVRGDWW KWKVAPYTID AVLIYAQRGS GKRASLYTDY 450
    TFAVWDGDRL TPFAKAYSGL TDEEIRQVDA FVRRNTLEKF GPVRTVTPEL 500
    VFELAFEGIQ RSNRHKSGIA VRFPRILRWR RDKRPADADT LEQVRAMLPE 550
    ES 552
    Length:552
    Mass (Da):62,873
    Last modified:July 10, 2007 - v1
    Checksum:i7B3BC45B3B20D5EA
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000686 Genomic DNA. Translation: ABQ89975.1.
    RefSeqiWP_011956324.1. NC_009523.1.
    YP_001275925.1. NC_009523.1.

    Genome annotation databases

    EnsemblBacteriaiABQ89975; ABQ89975; RoseRS_1583.
    GeneIDi5208538.
    KEGGirrs:RoseRS_1583.
    PATRICi23351332. VBIRosSp109359_1726.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000686 Genomic DNA. Translation: ABQ89975.1 .
    RefSeqi WP_011956324.1. NC_009523.1.
    YP_001275925.1. NC_009523.1.

    3D structure databases

    ProteinModelPortali A5UTM2.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 357808.RoseRS_1583.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABQ89975 ; ABQ89975 ; RoseRS_1583 .
    GeneIDi 5208538.
    KEGGi rrs:RoseRS_1583.
    PATRICi 23351332. VBIRosSp109359_1726.

    Phylogenomic databases

    eggNOGi COG1793.
    HOGENOMi HOG000036007.
    KOi K01971.
    OMAi RVWLWSR.
    OrthoDBi EOG6Q8HXT.

    Enzyme and pathway databases

    BioCyci RSP357808:GH5Z-1605-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR026333. ATP_dep_DNA_lig_pp_1105_fam.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF04675. DNA_ligase_A_N. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    TIGRFAMsi TIGR04120. DNA_lig_bact. 1 hit.
    PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: RS-1Imported.

    Entry informationi

    Entry nameiA5UTM2_ROSS1
    AccessioniPrimary (citable) accession number: A5UTM2
    Entry historyi
    Integrated into UniProtKB/TrEMBL: July 10, 2007
    Last sequence update: July 10, 2007
    Last modified: October 1, 2014
    This is version 48 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3