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A5UTM2 (A5UTM2_ROSS1) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 46. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:RoseRS_1583 EMBL ABQ89975.1
OrganismRoseiflexus sp. (strain RS-1) [Complete proteome] [HAMAP] EMBL ABQ89975.1
Taxonomic identifier357808 [NCBI]
Taxonomic lineageBacteriaChloroflexiChloroflexalesChloroflexaceaeRoseiflexus

Protein attributes

Sequence length552 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLigase EMBL ABQ89975.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processDNA recombination

Inferred from electronic annotation. Source: InterPro

DNA repair

Inferred from electronic annotation. Source: InterPro

   Molecular_functionATP binding

Inferred from electronic annotation. Source: InterPro

DNA binding

Inferred from electronic annotation. Source: InterPro

DNA ligase (ATP) activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
A5UTM2 [UniParc].

Last modified July 10, 2007. Version 1.
Checksum: 7B3BC45B3B20D5EA

FASTA55262,873
        10         20         30         40         50         60 
METHIPVFMH TFAQLYATLD ETTRTSVKIE ALTRYFERSE PADAAWAIFF LIGRRVRQAV 

        70         80         90        100        110        120 
PLPTLRAWAV EAAGIPDWLF GECYDAVGDF AETVTLLLLE PDEWTVDVDR SVLPFEGPQP 

       130        140        150        160        170        180 
LHRWVEEVLL PLRDQDETMQ RAIVQAVWAT LGGTERFVWN KLITGAFRVG VSQQLVVRAL 

       190        200        210        220        230        240 
ARVSGVDSST IAHRLMGEWT PSETFYRTLL ARDTTDADVS RPYPFCLAHP LDADPETLGP 

       250        260        270        280        290        300 
IDEWQAEWKW DGIRSQLIRR AGRTFLWSRG EELITDRFPE IAAIGALLPD GIVIDGEVLP 

       310        320        330        340        350        360 
WKDGVVLPFA QLQRRIGRRN LTKAILDEAP VALLAYDLLE LNGVDVRNQP LERRRAELER 

       370        380        390        400        410        420 
LIATCVPGNQ ALLISPVVVA ADWDDLAAQW ATSRERNVEG LMLKRRSSPY RVGRVRGDWW 

       430        440        450        460        470        480 
KWKVAPYTID AVLIYAQRGS GKRASLYTDY TFAVWDGDRL TPFAKAYSGL TDEEIRQVDA 

       490        500        510        520        530        540 
FVRRNTLEKF GPVRTVTPEL VFELAFEGIQ RSNRHKSGIA VRFPRILRWR RDKRPADADT 

       550 
LEQVRAMLPE ES 

« Hide

References

[1]"Complete sequence of Roseiflexus sp. RS-1."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chertkov O., Brettin T., Bruce D., Han C., Schmutz J., Larimer F., Land M. expand/collapse author list , Hauser L., Kyrpides N., Mikhailova N., Bryant D.A., Richardson P.
Submitted (APR-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: RS-1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000686 Genomic DNA. Translation: ABQ89975.1.
RefSeqYP_001275925.1. NC_009523.1.

3D structure databases

ProteinModelPortalA5UTM2.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING357808.RoseRS_1583.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABQ89975; ABQ89975; RoseRS_1583.
GeneID5208538.
KEGGrrs:RoseRS_1583.
PATRIC23351332. VBIRosSp109359_1726.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1793.
HOGENOMHOG000036007.
KOK01971.
OMARVWLWSR.
OrthoDBEOG6Q8HXT.

Enzyme and pathway databases

BioCycRSP357808:GH5Z-1605-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR04120. DNA_lig_bact. 1 hit.
PROSITEPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA5UTM2_ROSS1
AccessionPrimary (citable) accession number: A5UTM2
Entry history
Integrated into UniProtKB/TrEMBL: July 10, 2007
Last sequence update: July 10, 2007
Last modified: May 14, 2014
This is version 46 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)