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Protein
Submitted name:

ATP dependent DNA ligase

Gene

RoseRS_1583

Organism
Roseiflexus sp. (strain RS-1)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA binding Source: InterPro
  3. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciRSP357808:GH5Z-1605-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:RoseRS_1583Imported
OrganismiRoseiflexus sp. (strain RS-1)Imported
Taxonomic identifieri357808 [NCBI]
Taxonomic lineageiBacteriaChloroflexiChloroflexiaChloroflexalesRoseiflexineaeRoseiflexaceaeRoseiflexus
ProteomesiUP000006554: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi357808.RoseRS_1583.

Structurei

3D structure databases

ProteinModelPortaliA5UTM2.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1793.
HOGENOMiHOG000036007.
KOiK01971.
OMAiGQPYPFF.
OrthoDBiEOG6Q8HXT.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A5UTM2-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
METHIPVFMH TFAQLYATLD ETTRTSVKIE ALTRYFERSE PADAAWAIFF
60 70 80 90 100
LIGRRVRQAV PLPTLRAWAV EAAGIPDWLF GECYDAVGDF AETVTLLLLE
110 120 130 140 150
PDEWTVDVDR SVLPFEGPQP LHRWVEEVLL PLRDQDETMQ RAIVQAVWAT
160 170 180 190 200
LGGTERFVWN KLITGAFRVG VSQQLVVRAL ARVSGVDSST IAHRLMGEWT
210 220 230 240 250
PSETFYRTLL ARDTTDADVS RPYPFCLAHP LDADPETLGP IDEWQAEWKW
260 270 280 290 300
DGIRSQLIRR AGRTFLWSRG EELITDRFPE IAAIGALLPD GIVIDGEVLP
310 320 330 340 350
WKDGVVLPFA QLQRRIGRRN LTKAILDEAP VALLAYDLLE LNGVDVRNQP
360 370 380 390 400
LERRRAELER LIATCVPGNQ ALLISPVVVA ADWDDLAAQW ATSRERNVEG
410 420 430 440 450
LMLKRRSSPY RVGRVRGDWW KWKVAPYTID AVLIYAQRGS GKRASLYTDY
460 470 480 490 500
TFAVWDGDRL TPFAKAYSGL TDEEIRQVDA FVRRNTLEKF GPVRTVTPEL
510 520 530 540 550
VFELAFEGIQ RSNRHKSGIA VRFPRILRWR RDKRPADADT LEQVRAMLPE

ES
Length:552
Mass (Da):62,873
Last modified:July 10, 2007 - v1
Checksum:i7B3BC45B3B20D5EA
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000686 Genomic DNA. Translation: ABQ89975.1.
RefSeqiWP_011956324.1. NC_009523.1.
YP_001275925.1. NC_009523.1.

Genome annotation databases

EnsemblBacteriaiABQ89975; ABQ89975; RoseRS_1583.
GeneIDi5208538.
KEGGirrs:RoseRS_1583.
PATRICi23351332. VBIRosSp109359_1726.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000686 Genomic DNA. Translation: ABQ89975.1.
RefSeqiWP_011956324.1. NC_009523.1.
YP_001275925.1. NC_009523.1.

3D structure databases

ProteinModelPortaliA5UTM2.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi357808.RoseRS_1583.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABQ89975; ABQ89975; RoseRS_1583.
GeneIDi5208538.
KEGGirrs:RoseRS_1583.
PATRICi23351332. VBIRosSp109359_1726.

Phylogenomic databases

eggNOGiCOG1793.
HOGENOMiHOG000036007.
KOiK01971.
OMAiGQPYPFF.
OrthoDBiEOG6Q8HXT.

Enzyme and pathway databases

BioCyciRSP357808:GH5Z-1605-MONOMER.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: RS-1Imported.

Entry informationi

Entry nameiA5UTM2_ROSS1
AccessioniPrimary (citable) accession number: A5UTM2
Entry historyi
Integrated into UniProtKB/TrEMBL: July 10, 2007
Last sequence update: July 10, 2007
Last modified: January 7, 2015
This is version 49 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.