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Protein

30S ribosomal protein S8e

Gene

rps8e

Organism
Methanobrevibacter smithii (strain ATCC 35061 / DSM 861 / OCM 144 / PS)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein

Names & Taxonomyi

Protein namesi
Recommended name:
30S ribosomal protein S8eUniRule annotation
Gene namesi
Name:rps8eUniRule annotation
Ordered Locus Names:Msm_1486
OrganismiMethanobrevibacter smithii (strain ATCC 35061 / DSM 861 / OCM 144 / PS)
Taxonomic identifieri420247 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaMethanobacteriaMethanobacterialesMethanobacteriaceaeMethanobrevibacter
Proteomesi
  • UP000001992 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00003041691 – 12530S ribosomal protein S8eAdd BLAST125

Interactioni

Subunit structurei

Part of the 30S ribosomal subunit.UniRule annotation

Protein-protein interaction databases

STRINGi420247.Msm_1486.

Structurei

3D structure databases

ProteinModelPortaliA5UNB3.
SMRiA5UNB3.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the eukaryotic ribosomal protein eS8 family.UniRule annotation

Phylogenomic databases

eggNOGiarCOG04154. Archaea.
COG2007. LUCA.
HOGENOMiHOG000108969.
KOiK02995.
OMAiNPNYVRR.
OrthoDBiPOG093Z0F6M.

Family and domain databases

HAMAPiMF_00029. Ribosomal_S8e. 1 hit.
InterProiView protein in InterPro
IPR020919. Ribosomal_protein_S8e_arc.
IPR001047. Ribosomal_S8e.
IPR022309. Ribosomal_S8e/biogenesis_NSA2.
IPR018283. Ribosomal_S8e_CS.
PANTHERiPTHR10394. PTHR10394. 1 hit.
PfamiView protein in Pfam
PF01201. Ribosomal_S8e. 1 hit.
TIGRFAMsiTIGR00307. eS8. 1 hit.
PROSITEiView protein in PROSITE
PS01193. RIBOSOMAL_S8E. 1 hit.

Sequencei

Sequence statusi: Complete.

A5UNB3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAISQGKSTR LPSGARNVAN RGKRKAELGR DPAETRVDEK RLKKIRTRGG
60 70 80 90 100
NEKLRLATAN KMNLTDPATG KSQVVDVLGV IENSANPNYV RRNIITKGAI
110 120
VETPEGNAKV TSRPGQDGVL NGILI
Length:125
Mass (Da):13,456
Last modified:July 10, 2007 - v1
Checksum:iA2AED48348E263FA
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000678 Genomic DNA. Translation: ABQ87691.1.
RefSeqiWP_004033374.1. NC_009515.1.

Genome annotation databases

EnsemblBacteriaiABQ87691; ABQ87691; Msm_1486.
GeneIDi5216178.
KEGGimsi:Msm_1486.
PATRICifig|420247.28.peg.1479.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000678 Genomic DNA. Translation: ABQ87691.1.
RefSeqiWP_004033374.1. NC_009515.1.

3D structure databases

ProteinModelPortaliA5UNB3.
SMRiA5UNB3.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi420247.Msm_1486.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABQ87691; ABQ87691; Msm_1486.
GeneIDi5216178.
KEGGimsi:Msm_1486.
PATRICifig|420247.28.peg.1479.

Phylogenomic databases

eggNOGiarCOG04154. Archaea.
COG2007. LUCA.
HOGENOMiHOG000108969.
KOiK02995.
OMAiNPNYVRR.
OrthoDBiPOG093Z0F6M.

Family and domain databases

HAMAPiMF_00029. Ribosomal_S8e. 1 hit.
InterProiView protein in InterPro
IPR020919. Ribosomal_protein_S8e_arc.
IPR001047. Ribosomal_S8e.
IPR022309. Ribosomal_S8e/biogenesis_NSA2.
IPR018283. Ribosomal_S8e_CS.
PANTHERiPTHR10394. PTHR10394. 1 hit.
PfamiView protein in Pfam
PF01201. Ribosomal_S8e. 1 hit.
TIGRFAMsiTIGR00307. eS8. 1 hit.
PROSITEiView protein in PROSITE
PS01193. RIBOSOMAL_S8E. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiRS8E_METS3
AccessioniPrimary (citable) accession number: A5UNB3
Entry historyiIntegrated into UniProtKB/Swiss-Prot: September 11, 2007
Last sequence update: July 10, 2007
Last modified: June 7, 2017
This is version 55 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.