A5UMN3 (A5UMN3_METS3) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB EMBL ABQ87461.1

Gene names

Ordered Locus Names:

Msm_1256

Organism

Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) [Complete proteome] [HAMAP] EMBL ABQ87461.1

Taxonomic identifier

420247 [NCBI]

Taxonomic lineage

Archaea › Euryarchaeota › Methanobacteria › Methanobacteriales › Methanobacteriaceae › Methanobrevibacter

Protein attributes

Sequence length	226 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	riboflavin biosynthetic process Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	3,4-dihydroxy-2-butanone-4-phosphate synthase activity Inferred from electronic annotation. Source: InterPro metal ion binding Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A5UMN3 [UniParc]. Last modified July 10, 2007. Version 1. Checksum: 0CEEF32C29B636EA	FASTA	226	25,047
	10 20 30 40 50 60 MSKNDLEMGF EALRNGEFIL VYDDDDREGE VDMIIASEFV TPKSVATMRD NAGGLICNCL 70 80 90 100 110 120 APQYCDAINL PFMTDIMEAA SSKYPDLAEL APNDIPYDER SSFSIWVNHR DSFTGVTDHD 130 140 150 160 170 180 RAMTISEMAI MLKEERYGDF GKTFRSPGHV CLLRGADGLV KNRRGHTEIG LAMCEMAGVT 190 200 210 220 PVCVVCEMMD SKTGQATSVA DAKKYAEENG LVLLKGEDII KEYLKE

References

[1]

"Genomic and metabolic adaptations of Methanobrevibacter smithii to the human gut." Samuel B.S., Hansen E.E., Manchester J.K., Coutinho P.M., Henrissat B., Fulton R., Latreille P., Kim K., Wilson R.K., Gordon J.I. Proc. Natl. Acad. Sci. U.S.A. 104:10643-10648(2007) [PubMed: 17563350] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000678 Genomic DNA. Translation: ABQ87461.1.
RefSeq	YP_001273829.1. NC_009515.1.
3D structure databases
ProteinModelPortal	A5UMN3.
SMR	A5UMN3. Positions 4-223.
ModBase	Search...
Protein-protein interaction databases
STRING	A5UMN3.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5215774.
GenomeReviews	Gene locus Msm_1256 in contig CP000678_GR.
KEGG	msi:Msm_1256.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	arNOG05755.
HOGENOM	HBG735778.
OMA	GDMIFAA.
ProtClustDB	CLSK876051.
Family and domain databases
InterPro	IPR017945. DHBP_synth_RibB-like_a/b_dom. IPR000422. DHBP_synthase_RibB. [Graphical view]
Gene3D	G3DSA:3.90.870.10. DHBP_synth_RibB-like_a/b_dom. 1 hit.
KO	K02858.
Pfam	PF00926. DHBP_synthase. 1 hit. [Graphical view]
SUPFAM	SSF55821. DHBP_synth_RibB-like_a/b_dom. 1 hit.
TIGRFAMs	TIGR00506. RibB. 1 hit.
ProtoNet	Search...

Entry information

Entry name

A5UMN3_METS3

Accession

Primary (citable) accession number: A5UMN3

Entry history

Integrated into UniProtKB/TrEMBL:	July 10, 2007
Last sequence update:	July 10, 2007
Last modified:	January 25, 2012
This is version 36 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)