A5UM98 (A5UM98_METS3) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Coenzyme F420-reducing hydrogenase, beta subunit, FrhB EMBL ABQ87326.1
EC=1.12.98.1 EMBL ABQ87326.1

Gene names

Ordered Locus Names:

Msm_1121

Organism

Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) [Complete proteome] [HAMAP] EMBL ABQ87326.1

Taxonomic identifier

420247 [NCBI]

Taxonomic lineage

Archaea › Euryarchaeota › Methanobacteria › Methanobacteriales › Methanobacteriaceae › Methanobrevibacter

Protein attributes

Sequence length	285 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Oxidoreductase EMBL ABQ87326.1
Technical term	Complete proteome
Gene Ontology (GO)
Molecular function	coenzyme F420 hydrogenase activity Inferred from electronic annotation. Source: EC flavin adenine dinucleotide binding Inferred from electronic annotation. Source: InterPro iron-sulfur cluster binding Inferred from electronic annotation. Source: InterPro nickel cation binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A5UM98 [UniParc]. Last modified July 10, 2007. Version 1. Checksum: 4D8852DB3C1F2BFB	FASTA	285	30,719
	10 20 30 40 50 60 MVLGTYKEAV AARSTDKRIQ EVAQDGGIAS ALLIYALENN IIEGAVVAGD PGDDWVPIPE 70 80 90 100 110 120 IATTADEILS AAGTKYSMSP NVWGIKEAAR QHGIESIGTV VTPCQMQGIR KMQAYPFSTR 130 140 150 160 170 180 FIADKIKLLV GIFCMENFPM ASLDTFTKGL MDVDLDKVTK MDIGKGKFWI YTEGSDEPQG 190 200 210 220 230 240 IPIKATHGYE QAGCNICNDY VCEFADISTG SVGAPDGWST VLTRTDAGAD IFSAAVDAGL 250 260 270 280 IETKPMDDVK PGLGLLEKLA KGKKDKGKKE IERRAKMGVM TPTYY

References

[1]

"Genomic and metabolic adaptations of Methanobrevibacter smithii to the human gut." Samuel B.S., Hansen E.E., Manchester J.K., Coutinho P.M., Henrissat B., Fulton R., Latreille P., Kim K., Wilson R.K., Gordon J.I. Proc. Natl. Acad. Sci. U.S.A. 104:10643-10648(2007) [PubMed: 17563350] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000678 Genomic DNA. Translation: ABQ87326.1.
RefSeq	YP_001273694.1. NC_009515.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	A5UM98.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5215949.
GenomeReviews	Gene locus Msm_1121 in contig CP000678_GR.
KEGG	msi:Msm_1121.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	arNOG04838.
HOGENOM	HBG726753.
OMA	AVREYGC.
ProtClustDB	PRK09325.
Family and domain databases
InterPro	IPR007516. Co_F420_Hydgase/DH_bsu_N. IPR017679. Coenz_F420_hydrogenase_bsu. IPR007525. FrhB_FdhB_C. [Graphical view]
KO	K00441.
Pfam	PF04432. FrhB_FdhB_C. 1 hit. PF04422. FrhB_FdhB_N. 1 hit. [Graphical view]
TIGRFAMs	TIGR03289. FrhB. 1 hit.
ProtoNet	Search...

Entry information

Entry name

A5UM98_METS3

Accession

Primary (citable) accession number: A5UM98

Entry history

Integrated into UniProtKB/TrEMBL:	July 10, 2007
Last sequence update:	July 10, 2007
Last modified:	November 16, 2011
This is version 26 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)