A5ULZ6 (A5ULZ6_METS3) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Methyl-coenzyme M reductase, beta subunit, McrB EMBL ABQ87224.1
EC=2.8.4.1 EMBL ABQ87224.1

Gene names

Ordered Locus Names:

Msm_1019

Organism

Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) [Complete proteome] [HAMAP] EMBL ABQ87224.1

Taxonomic identifier

420247 [NCBI]

Taxonomic lineage

Archaea › Euryarchaeota › Methanobacteria › Methanobacteriales › Methanobacteriaceae › Methanobrevibacter

Protein attributes

Sequence length	443 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Transferase EMBL ABQ87224.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	methanogenesis Inferred from electronic annotation. Source: InterPro
Molecular function	coenzyme-B sulfoethylthiotransferase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A5ULZ6 [UniParc]. Last modified July 10, 2007. Version 1. Checksum: 0527DECF1D781BA3	FASTA	443	46,740
	10 20 30 40 50 60 MAKFDDKVDL YDDRGSLVVS DVPIEALSPL RNTAIQNIVK GVKRTVAVNL EGLEKSVKTG 70 80 90 100 110 120 SVGGDKSKIL GRELDIDIVA NAGAIAEKMK EMIQISEDDD TKVEPISGGK RLLVQVPSKR 130 140 150 160 170 180 IDVAAEYSVA PLSTATSLVQ AIIDVCDVSI YDANFVKAAV LGRCPQSVDY KGSNIATMLD 190 200 210 220 230 240 IPQKLEGAGY ALRGVKANDF AAATLKNTFQ ATALASIFEQ TAMFEMGDAI GAYERLHLLG 250 260 270 280 290 300 LAYQGMNADN MVLDLVKDNA KEGTVGSVVN GTIARAEADG VIAPQKDLTD FSIYNTDDAA 310 320 330 340 350 360 LWNAYAAAGA AAAVMVNIGA ARAAQGIPST LLYFNDNIEF ATGLPSIDYG RAEGVAVGFS 370 380 390 400 410 420 FFSHSIYGGG GPGLFNGNHV VTRHSKGFCI PCVAAAMSLD AGTQLFSPEA TSGLIKEVYS 430 440 QVDEFREPLK YVALAADDIK GDI

References

[1]

"Genomic and metabolic adaptations of Methanobrevibacter smithii to the human gut." Samuel B.S., Hansen E.E., Manchester J.K., Coutinho P.M., Henrissat B., Fulton R., Latreille P., Kim K., Wilson R.K., Gordon J.I. Proc. Natl. Acad. Sci. U.S.A. 104:10643-10648(2007) [PubMed: 17563350] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000678 Genomic DNA. Translation: ABQ87224.1.
RefSeq	YP_001273592.1. NC_009515.1.
3D structure databases
ProteinModelPortal	A5ULZ6.
SMR	A5ULZ6. Positions 2-443.
ModBase	Search...
Protein-protein interaction databases
STRING	A5ULZ6.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5215715.
GenomeReviews	Gene locus Msm_1019 in contig CP000678_GR.
KEGG	msi:Msm_1019.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	arNOG04804.
HOGENOM	HBG538593.
OMA	KWNAYAA.
ProtClustDB	CLSK876059.
Family and domain databases
InterPro	IPR022681. MCR_a/b_chain_a-bundle. IPR008924. Me_CoM_Rdtase_asu/bsu_C. IPR015823. Me_CoM_Rdtase_asu_N_sub2. IPR003179. Me_CoM_Rdtase_bsu. IPR022679. Me_CoM_Rdtase_bsu_C. IPR022680. Me_CoM_Rdtase_bsu_N. IPR009024. Me_CoM_Rdtase_Fd-like_fold. [Graphical view]
Gene3D	G3DSA:1.20.840.10. MCR_a/b_chain_a-bundle. 2 hits. G3DSA:3.30.70.470. Me_CoM_Rdtase_asu_N_sub2. 1 hit.
KO	K00401.
Pfam	PF02241. MCR_beta. 1 hit. PF02783. MCR_beta_N. 1 hit. [Graphical view]
PIRSF	PIRSF000263. Meth_CoM_rd_beta. 1 hit.
SUPFAM	SSF48081. MCR_alpha_beta_C. 1 hit. SSF55088. MCR_fer_like. 1 hit.
TIGRFAMs	TIGR03257. Met_CoM_red_bet. 1 hit.
ProtoNet	Search...

Entry information

Entry name

A5ULZ6_METS3

Accession

Primary (citable) accession number: A5ULZ6

Entry history

Integrated into UniProtKB/TrEMBL:	July 10, 2007
Last sequence update:	July 10, 2007
Last modified:	November 16, 2011
This is version 24 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)