A5UK54 (A5UK54_METS3) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
4-diphosphocytidyl-2-methyl-D-erithritol synthase, IspD EMBL ABQ86582.1
EC=2.7.7.60 EMBL ABQ86582.1

Gene names

Ordered Locus Names:

Msm_0377

Organism

Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) [Complete proteome] [HAMAP] EMBL ABQ86582.1

Taxonomic identifier

420247 [NCBI]

Taxonomic lineage

Archaea › Euryarchaeota › Methanobacteria › Methanobacteriales › Methanobacteriaceae › Methanobrevibacter

Protein attributes

Sequence length	236 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

Ontologies

Keywords
Molecular function	Nucleotidyltransferase EMBL ABQ86582.1 Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	isoprenoid biosynthetic process Inferred from electronic annotation. Source: InterPro
Molecular function	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A5UK54 [UniParc]. Last modified July 10, 2007. Version 1. Checksum: 43466145CA657DAC	FASTA	236	26,600
	10 20 30 40 50 60 MIFVAVLAGG IGSRMGDTDT PKQFLNLGDR PILIHTIEKF VIMDEIDEVI VLTPQNFINH 70 80 90 100 110 120 TKHLIEEYTL NNDKIVVIEG GKTRNDTLKN SIDYIYENYS VDDDSIIITH DSVRPFVTHR 130 140 150 160 170 180 IIQDNIKAAK KYGACDTVIP ATDTIVESRD GKIIKNIPIR DYFYQGQTPQ TFKINKLNSL 190 200 210 220 230 INDLTDGEKE ILTDAAKIFV LKGKDVALVD GDVTNIKITY PYDLKLANTI LNDKND

References

[1]

"Genomic and metabolic adaptations of Methanobrevibacter smithii to the human gut." Samuel B.S., Hansen E.E., Manchester J.K., Coutinho P.M., Henrissat B., Fulton R., Latreille P., Kim K., Wilson R.K., Gordon J.I. Proc. Natl. Acad. Sci. U.S.A. 104:10643-10648(2007) [PubMed: 17563350] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000678 Genomic DNA. Translation: ABQ86582.1.
RefSeq	YP_001272950.1. NC_009515.1.
3D structure databases
ProteinModelPortal	A5UK54.
ModBase	Search...
Protein-protein interaction databases
STRING	A5UK54.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5216923.
GenomeReviews	Gene locus Msm_0377 in contig CP000678_GR.
KEGG	msi:Msm_0377.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	arNOG13939.
HOGENOM	HBG672839.
OMA	GELFNIK.
ProtClustDB	PRK00155.
Family and domain databases
HAMAP	MF_00108. IspD. [Tree]
InterPro	IPR001228. ISPD_synthase. IPR018294. ISPD_synthase_CS. [Graphical view]
KO	K00991.
Pfam	PF01128. IspD. 1 hit. [Graphical view]
PROSITE	PS01295. ISPD. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A5UK54_METS3

Accession

Primary (citable) accession number: A5UK54

Entry history

Integrated into UniProtKB/TrEMBL:	July 10, 2007
Last sequence update:	July 10, 2007
Last modified:	December 14, 2011
This is version 23 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)