A5UJW1 (A5UJW1_METS3) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Ribose-5-phosphate isomerase A HAMAP MF_00170
EC=5.3.1.6 HAMAP MF_00170

Alternative name(s):
Phosphoriboisomerase A HAMAP MF_00170

Gene names

Name:	rpiA HAMAP MF_00170
Ordered Locus Names:	Msm_0284

Organism

Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) [Complete proteome] [HAMAP] EMBL ABQ86489.1

Taxonomic identifier

420247 [NCBI]

Taxonomic lineage

Archaea › Euryarchaeota › Methanobacteria › Methanobacteriales › Methanobacteriaceae › Methanobrevibacter

Protein attributes

Sequence length	221 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	D-ribose 5-phosphate = D-ribulose 5-phosphate. HAMAP MF_00170
Pathway	Carbohydrate degradation; pentose phosphate pathway; D-ribose 5-phosphate from D-ribulose 5-phosphate (non-oxidative stage): step 1/1. HAMAP MF_00170
Sequence similarities	Belongs to the ribose 5-phosphate isomerase family. HAMAP MF_00170

Ontologies

Keywords
Molecular function	Isomerase HAMAP MF_00170 EMBL ABQ86489.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	pentose-phosphate shunt, non-oxidative branch Inferred from electronic annotation. Source: HAMAP
Molecular function	ribose-5-phosphate isomerase activity Inferred from electronic annotation. Source: HAMAP
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A5UJW1 [UniParc]. Last modified July 10, 2007. Version 1. Checksum: EA2A2EB42F9A461B	FASTA	221	24,064
	10 20 30 40 50 60 MNLKKEAGYK AAEYVTDGDI LGLGTGSTTH YFIEAVGKRI ADEGINVMGI PTSFQSLLLA 70 80 90 100 110 120 KQWNIPVTSL EEHDIDLAVD GADEVDKNLN LVKGGGAAHT KEKIVDYSAK QFIVIVDESK 130 140 150 160 170 180 YVEEIGNFPV PVEVIPDASR VVIQTLEDMG AECEIRMGER KDGPVITDNG NFVIDAKFEK 190 200 210 220 IESPMHLEID LNSIPGVVEN GIFTQMVDKV IIGTSEGIKE L

References

[1]

"Genomic and metabolic adaptations of Methanobrevibacter smithii to the human gut." Samuel B.S., Hansen E.E., Manchester J.K., Coutinho P.M., Henrissat B., Fulton R., Latreille P., Kim K., Wilson R.K., Gordon J.I. Proc. Natl. Acad. Sci. U.S.A. 104:10643-10648(2007) [PubMed: 17563350] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000678 Genomic DNA. Translation: ABQ86489.1.
RefSeq	YP_001272857.1. NC_009515.1.
3D structure databases
ProteinModelPortal	A5UJW1.
SMR	A5UJW1. Positions 2-221.
ModBase	Search...
Protein-protein interaction databases
STRING	A5UJW1.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5216743.
GenomeReviews	Gene locus Msm_0284 in contig CP000678_GR.
KEGG	msi:Msm_0284.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	arNOG07879.
HOGENOM	HBG515603.
OMA	GGDPEYR.
ProtClustDB	PRK00702.
Family and domain databases
HAMAP	MF_00170. Rib_5P_isom_A. [Tree]
InterPro	IPR004788. Ribose5P_isomerase_typA. IPR020672. Ribose5P_isomerase_typA_subgr. [Graphical view]
KO	K01807.
PANTHER	PTHR11934. RpiA. 1 hit.
Pfam	PF06026. Rib_5-P_isom_A. 1 hit. [Graphical view]
TIGRFAMs	TIGR00021. RpiA. 1 hit.
ProtoNet	Search...

Entry information

Entry name

A5UJW1_METS3

Accession

Primary (citable) accession number: A5UJW1

Entry history

Integrated into UniProtKB/TrEMBL:	July 10, 2007
Last sequence update:	July 10, 2007
Last modified:	November 16, 2011
This is version 27 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)