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Protein

Mannosyltransferase

Gene

alg9

Organism
Danio rerio (Zebrafish) (Brachydanio rerio)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

GlycosyltransferaseUniRule annotation, Transferase

Enzyme and pathway databases

ReactomeiR-DRE-446193. Biosynthesis of the N-glycan precursor (dolichol lipid-linked oligosaccharide, LLO) and transfer to a nascent protein.

Protein family/group databases

CAZyiGT22. Glycosyltransferase Family 22.

Names & Taxonomyi

Protein namesi
Recommended name:
MannosyltransferaseUniRule annotation (EC:2.4.1.-UniRule annotation)
Gene namesi
Name:alg9Imported
OrganismiDanio rerio (Zebrafish) (Brachydanio rerio)Imported
Taxonomic identifieri7955 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiOstariophysiCypriniformesCyprinidaeDanio
Proteomesi
  • UP000000437 Componenti: Chromosome 5

Organism-specific databases

ZFINiZDB-GENE-040426-1270. alg9.

Subcellular locationi

  • Endoplasmic reticulum membrane UniRule annotation; Multi-pass membrane protein UniRule annotation

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei141 – 16121HelicalUniRule annotationAdd
BLAST
Transmembranei173 – 19927HelicalUniRule annotationAdd
BLAST
Transmembranei219 – 24325HelicalUniRule annotationAdd
BLAST
Transmembranei255 – 27824HelicalUniRule annotationAdd
BLAST
Transmembranei315 – 33925HelicalUniRule annotationAdd
BLAST
Transmembranei351 – 36919HelicalUniRule annotationAdd
BLAST
Transmembranei375 – 39420HelicalUniRule annotationAdd
BLAST
Transmembranei415 – 43723HelicalUniRule annotationAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Endoplasmic reticulumUniRule annotation, Membrane

PTM / Processingi

Proteomic databases

PaxDbiA5PMV6.
PeptideAtlasiA5PMV6.

Expressioni

Gene expression databases

BgeeiA5PMV6.

Interactioni

Protein-protein interaction databases

STRINGi7955.ENSDARP00000017149.

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyltransferase 22 family.UniRule annotation

Keywords - Domaini

Transmembrane, Transmembrane helixUniRule annotation

Phylogenomic databases

eggNOGiKOG2515. Eukaryota.
ENOG410XP6D. LUCA.
GeneTreeiENSGT00390000004731.
HOGENOMiHOG000205434.
HOVERGENiHBG062906.
InParanoidiA5PMV6.
KOiK03846.
OMAiAPLNIVW.
OrthoDBiEOG74TWZM.
PhylomeDBiA5PMV6.

Family and domain databases

InterProiIPR005599. GPI_mannosylTrfase.
[Graphical view]
PANTHERiPTHR22760. PTHR22760. 1 hit.
PfamiPF03901. Glyco_transf_22. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A5PMV6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MATKSLRQRS RRGSKQDANN VNNTPTPENR ATKDDKCAED NKSSDPRNES
60 70 80 90 100
SGKAGQVWAP EGSTAFKCLV SARFCAALLS NLSDCDETFN YWEPTHYLLY
110 120 130 140 150
GTGMQTWEYS PSYAIRSYAY LWLHALPACF HAKILQTNKV LVFYFLRCML
160 170 180 190 200
AFGCCVCELY FYKAVCKKFG LHVGRLLLAF LVLSAGMFCS SAAFLPSTFC
210 220 230 240 250
MYSTVVAMTG WFQGRPSLAV LGVAAGAIVG WPFSALLGIP IAFDLLWLKK
260 270 280 290 300
KWKSFIMWTL VALLLFLVPV VIVDSYYYGK LVIAPLNIIL YNVFTPHGPD
310 320 330 340 350
LYGTEPWHYY FVNGFLNFNI VFVLALFSLP LTALMEALLQ RFNVQNLGRP
360 370 380 390 400
YWLTLSPMYL WMLVFFTRPH KEERFLFPIY PLICLCGAVA LSSLQKCYHF
410 420 430 440 450
IFQRYRLEHY TISSNWLALG SVLLFGVLSL SRSVALFRGY HAPLDLYPEF
460 470 480 490 500
HRIAKDPAIH TVPEGRLVNV CVGKEWYRFP SSFFLPNNWH LQFIQSEFRG
510 520 530 540 550
QLPKPYAMGP DATWIIPPDM NDQNLEETSR YVDLKQCHYL VDLATETEAP
560 570 580 590 600
REPRYAANKE EWSVIADKPF LDSTRSSRIL RAFFIPFLSE QYNTYSRYVI
610
LKPRRPKHTR KRPQA
Length:615
Mass (Da):70,696
Last modified:July 10, 2007 - v1
Checksum:i8C6E7F59A4A0E85D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX901896 Genomic DNA. No translation available.
RefSeqiNP_956919.2. NM_200625.2.
UniGeneiDr.82502.

Genome annotation databases

EnsembliENSDART00000005090; ENSDARP00000017149; ENSDARG00000012840.
GeneIDi393598.
KEGGidre:393598.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX901896 Genomic DNA. No translation available.
RefSeqiNP_956919.2. NM_200625.2.
UniGeneiDr.82502.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi7955.ENSDARP00000017149.

Protein family/group databases

CAZyiGT22. Glycosyltransferase Family 22.

Proteomic databases

PaxDbiA5PMV6.
PeptideAtlasiA5PMV6.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSDART00000005090; ENSDARP00000017149; ENSDARG00000012840.
GeneIDi393598.
KEGGidre:393598.

Organism-specific databases

CTDi79796.
ZFINiZDB-GENE-040426-1270. alg9.

Phylogenomic databases

eggNOGiKOG2515. Eukaryota.
ENOG410XP6D. LUCA.
GeneTreeiENSGT00390000004731.
HOGENOMiHOG000205434.
HOVERGENiHBG062906.
InParanoidiA5PMV6.
KOiK03846.
OMAiAPLNIVW.
OrthoDBiEOG74TWZM.
PhylomeDBiA5PMV6.

Enzyme and pathway databases

ReactomeiR-DRE-446193. Biosynthesis of the N-glycan precursor (dolichol lipid-linked oligosaccharide, LLO) and transfer to a nascent protein.

Gene expression databases

BgeeiA5PMV6.

Family and domain databases

InterProiIPR005599. GPI_mannosylTrfase.
[Graphical view]
PANTHERiPTHR22760. PTHR22760. 1 hit.
PfamiPF03901. Glyco_transf_22. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "The zebrafish reference genome sequence and its relationship to the human genome."
    Howe K., Clark M.D., Torroja C.F., Torrance J., Berthelot C., Muffato M., Collins J.E., Humphray S., McLaren K., Matthews L., McLaren S., Sealy I., Caccamo M., Churcher C., Scott C., Barrett J.C., Koch R., Rauch G.J.
    , White S., Chow W., Kilian B., Quintais L.T., Guerra-Assuncao J.A., Zhou Y., Gu Y., Yen J., Vogel J.H., Eyre T., Redmond S., Banerjee R., Chi J., Fu B., Langley E., Maguire S.F., Laird G.K., Lloyd D., Kenyon E., Donaldson S., Sehra H., Almeida-King J., Loveland J., Trevanion S., Jones M., Quail M., Willey D., Hunt A., Burton J., Sims S., McLay K., Plumb B., Davis J., Clee C., Oliver K., Clark R., Riddle C., Elliot D., Threadgold G., Harden G., Ware D., Begum S., Mortimore B., Kerry G., Heath P., Phillimore B., Tracey A., Corby N., Dunn M., Johnson C., Wood J., Clark S., Pelan S., Griffiths G., Smith M., Glithero R., Howden P., Barker N., Lloyd C., Stevens C., Harley J., Holt K., Panagiotidis G., Lovell J., Beasley H., Henderson C., Gordon D., Auger K., Wright D., Collins J., Raisen C., Dyer L., Leung K., Robertson L., Ambridge K., Leongamornlert D., McGuire S., Gilderthorp R., Griffiths C., Manthravadi D., Nichol S., Barker G., Whitehead S., Kay M., Brown J., Murnane C., Gray E., Humphries M., Sycamore N., Barker D., Saunders D., Wallis J., Babbage A., Hammond S., Mashreghi-Mohammadi M., Barr L., Martin S., Wray P., Ellington A., Matthews N., Ellwood M., Woodmansey R., Clark G., Cooper J., Tromans A., Grafham D., Skuce C., Pandian R., Andrews R., Harrison E., Kimberley A., Garnett J., Fosker N., Hall R., Garner P., Kelly D., Bird C., Palmer S., Gehring I., Berger A., Dooley C.M., Ersan-Urun Z., Eser C., Geiger H., Geisler M., Karotki L., Kirn A., Konantz J., Konantz M., Oberlander M., Rudolph-Geiger S., Teucke M., Lanz C., Raddatz G., Osoegawa K., Zhu B., Rapp A., Widaa S., Langford C., Yang F., Schuster S.C., Carter N.P., Harrow J., Ning Z., Herrero J., Searle S.M., Enright A., Geisler R., Plasterk R.H., Lee C., Westerfield M., de Jong P.J., Zon L.I., Postlethwait J.H., Nusslein-Volhard C., Hubbard T.J., Roest Crollius H., Rogers J., Stemple D.L.
    Nature 496:498-503(2013) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: TuebingenImported.
  2. Ensembl
    Submitted (AUG-2013) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: TuebingenImported.

Entry informationi

Entry nameiA5PMV6_DANRE
AccessioniPrimary (citable) accession number: A5PMV6
Entry historyi
Integrated into UniProtKB/TrEMBL: July 10, 2007
Last sequence update: July 10, 2007
Last modified: July 6, 2016
This is version 62 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.