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A5PLL1

- AN34B_HUMAN

UniProt

A5PLL1 - AN34B_HUMAN

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Protein
Ankyrin repeat domain-containing protein 34B
Gene
ANKRD34B
Organism
Homo sapiens (Human)
Status
Reviewed - Annotation score: 2 out of 5 - Experimental evidence at transcript leveli

Names & Taxonomyi

Protein namesi
Recommended name:
Ankyrin repeat domain-containing protein 34B
Gene namesi
OrganismiHomo sapiens (Human)
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
ProteomesiUP000005640: Chromosome 5

Organism-specific databases

HGNCiHGNC:33736. ANKRD34B.

Subcellular locationi

Cytoplasm. Nucleus By similarity

GO - Cellular componenti

  1. cytoplasm Source: UniProtKB-SubCell
  2. nucleus Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm, Nucleus

Pathology & Biotechi

Organism-specific databases

PharmGKBiPA162376576.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 514514Ankyrin repeat domain-containing protein 34B
PRO_0000319102Add
BLAST

Post-translational modificationi

Phosphorylated By similarity.

Keywords - PTMi

Phosphoprotein

Proteomic databases

PaxDbiA5PLL1.
PRIDEiA5PLL1.

PTM databases

PhosphoSiteiA5PLL1.

Expressioni

Gene expression databases

BgeeiA5PLL1.
CleanExiHS_ANKRD34B.
GenevestigatoriA5PLL1.

Organism-specific databases

HPAiHPA043327.

Interactioni

Protein-protein interaction databases

STRINGi9606.ENSP00000339802.

Structurei

3D structure databases

ProteinModelPortaliA5PLL1.
SMRiA5PLL1. Positions 8-139.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Repeati9 – 3830ANK 1
Add
BLAST
Repeati42 – 7938ANK 2
Add
BLAST
Repeati83 – 11331ANK 3
Add
BLAST
Repeati117 – 14630ANK 4
Add
BLAST

Sequence similaritiesi

Belongs to the ANKRD34 family.
Contains 4 ANK repeats.

Keywords - Domaini

ANK repeat, Repeat

Phylogenomic databases

eggNOGiNOG68360.
HOGENOMiHOG000033934.
HOVERGENiHBG100441.
InParanoidiA5PLL1.
OMAiIKAVHQS.
OrthoDBiEOG7V49Z4.
PhylomeDBiA5PLL1.
TreeFamiTF331155.

Family and domain databases

Gene3Di1.25.40.20. 1 hit.
InterProiIPR002110. Ankyrin_rpt.
IPR020683. Ankyrin_rpt-contain_dom.
[Graphical view]
PfamiPF12796. Ank_2. 1 hit.
[Graphical view]
SMARTiSM00248. ANK. 4 hits.
[Graphical view]
SUPFAMiSSF48403. SSF48403. 1 hit.
PROSITEiPS50297. ANK_REP_REGION. 1 hit.
PS50088. ANK_REPEAT. 2 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A5PLL1-1 [UniParc]FASTAAdd to Basket

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MDEGMEISSE GNSLIKAVHQ SRLRLTRLLL EGGAYINESN DRGETPLMIA    50
CKTKHVDHQS VSKAKMVKYL LENNADPNIQ DKSGKTALMH ACLEKAGPEV 100
VSLLLKSGAD LSLQDHSSYS ALVYAINSED TETLKVLLSA CKAKGKEVII 150
ITTAKLPCGK HTTKQYLNMP PVDIDGCHSP ATCTTPSEID IKTASSPLSH 200
SSETELTLFG FKDLELAGSN DDTWDPGSPV RKPALAPKGP KLPHAPPWVK 250
SPPLLMHQNR VASLQEELQD ITPEEELSYK TNGLALSKRF ITRHQSIDVK 300
DTAHLLRAFD QASSRKMSYD EINCQSYLSE GNQQCIEVPV DQDPDSNQTI 350
FASTLRSIVQ KRNLGANHYS SDSQLSAGLT PPTSEDGKAL IGKKKILSPS 400
PSQLSESKEL LENIPPGPLS RRNHAVLERR GSGAFPLDHS VTQTRQGFLP 450
PLNVNSHPPI SDINVNNKIC SLLSCGQKVL MPTVPIFPKE FKSKKMLLRR 500
QSLQTEQIKQ LVNF 514
Length:514
Mass (Da):56,414
Last modified:October 5, 2010 - v3
Checksum:i65B1CC8F92E0730E
GO

Natural variant

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Natural varianti156 – 1561L → S.1 Publication
Corresponds to variant rs32857 [ dbSNP | Ensembl ].
VAR_038952

Sequence conflict

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti429 – 4291R → G in CAH18341. 1 Publication

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CR749535 mRNA. Translation: CAH18341.1.
AC008434 Genomic DNA. No translation available.
BC137441 mRNA. Translation: AAI37442.1.
BC137442 mRNA. Translation: AAI37443.1.
BC142957 mRNA. Translation: AAI42958.1.
CCDSiCCDS34194.1.
RefSeqiNP_001004441.2. NM_001004441.2.
XP_006714662.1. XM_006714599.1.
UniGeneiHs.519404.

Genome annotation databases

EnsembliENST00000338682; ENSP00000339802; ENSG00000189127.
GeneIDi340120.
KEGGihsa:340120.
UCSCiuc003kgw.3. human.

Keywords - Coding sequence diversityi

Polymorphism

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CR749535 mRNA. Translation: CAH18341.1 .
AC008434 Genomic DNA. No translation available.
BC137441 mRNA. Translation: AAI37442.1 .
BC137442 mRNA. Translation: AAI37443.1 .
BC142957 mRNA. Translation: AAI42958.1 .
CCDSi CCDS34194.1.
RefSeqi NP_001004441.2. NM_001004441.2.
XP_006714662.1. XM_006714599.1.
UniGenei Hs.519404.

3D structure databases

ProteinModelPortali A5PLL1.
SMRi A5PLL1. Positions 8-139.
ModBasei Search...

Protein-protein interaction databases

STRINGi 9606.ENSP00000339802.

PTM databases

PhosphoSitei A5PLL1.

Proteomic databases

PaxDbi A5PLL1.
PRIDEi A5PLL1.

Protocols and materials databases

DNASUi 340120.
Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENST00000338682 ; ENSP00000339802 ; ENSG00000189127 .
GeneIDi 340120.
KEGGi hsa:340120.
UCSCi uc003kgw.3. human.

Organism-specific databases

CTDi 340120.
GeneCardsi GC05M079888.
H-InvDBi HIX0200791.
HGNCi HGNC:33736. ANKRD34B.
HPAi HPA043327.
neXtProti NX_A5PLL1.
PharmGKBi PA162376576.
GenAtlasi Search...

Phylogenomic databases

eggNOGi NOG68360.
HOGENOMi HOG000033934.
HOVERGENi HBG100441.
InParanoidi A5PLL1.
OMAi IKAVHQS.
OrthoDBi EOG7V49Z4.
PhylomeDBi A5PLL1.
TreeFami TF331155.

Miscellaneous databases

ChiTaRSi ANKRD34B. human.
GenomeRNAii 340120.
NextBioi 97704.
PROi A5PLL1.

Gene expression databases

Bgeei A5PLL1.
CleanExi HS_ANKRD34B.
Genevestigatori A5PLL1.

Family and domain databases

Gene3Di 1.25.40.20. 1 hit.
InterProi IPR002110. Ankyrin_rpt.
IPR020683. Ankyrin_rpt-contain_dom.
[Graphical view ]
Pfami PF12796. Ank_2. 1 hit.
[Graphical view ]
SMARTi SM00248. ANK. 4 hits.
[Graphical view ]
SUPFAMi SSF48403. SSF48403. 1 hit.
PROSITEi PS50297. ANK_REP_REGION. 1 hit.
PS50088. ANK_REPEAT. 2 hits.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA], VARIANT SER-156.
    Tissue: Rectum tumor.
  2. "The DNA sequence and comparative analysis of human chromosome 5."
    Schmutz J., Martin J., Terry A., Couronne O., Grimwood J., Lowry S., Gordon L.A., Scott D., Xie G., Huang W., Hellsten U., Tran-Gyamfi M., She X., Prabhakar S., Aerts A., Altherr M., Bajorek E., Black S.
    , Branscomb E., Caoile C., Challacombe J.F., Chan Y.M., Denys M., Detter J.C., Escobar J., Flowers D., Fotopulos D., Glavina T., Gomez M., Gonzales E., Goodstein D., Grigoriev I., Groza M., Hammon N., Hawkins T., Haydu L., Israni S., Jett J., Kadner K., Kimball H., Kobayashi A., Lopez F., Lou Y., Martinez D., Medina C., Morgan J., Nandkeshwar R., Noonan J.P., Pitluck S., Pollard M., Predki P., Priest J., Ramirez L., Retterer J., Rodriguez A., Rogers S., Salamov A., Salazar A., Thayer N., Tice H., Tsai M., Ustaszewska A., Vo N., Wheeler J., Wu K., Yang J., Dickson M., Cheng J.-F., Eichler E.E., Olsen A., Pennacchio L.A., Rokhsar D.S., Richardson P., Lucas S.M., Myers R.M., Rubin E.M.
    Nature 431:268-274(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
  3. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: Brain.

Entry informationi

Entry nameiAN34B_HUMAN
AccessioniPrimary (citable) accession number: A5PLL1
Secondary accession number(s): B2RPH1, Q68D79
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 26, 2008
Last sequence update: October 5, 2010
Last modified: July 9, 2014
This is version 58 of the entry and version 3 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Human chromosome 5
    Human chromosome 5: entries, gene names and cross-references to MIM
  2. Human entries with polymorphisms or disease mutations
    List of human entries with polymorphisms or disease mutations
  3. Human polymorphisms and disease mutations
    Index of human polymorphisms and disease mutations
  4. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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