A5PK31 (A5PK31_BOVIN) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
AP1S3 protein EMBL AAI42334.1

Submitted name:
Uncharacterized protein Ensembl ENSBTAP00000014784

Gene names

Name:

AP1S3 Ensembl ENSBTAP00000014784 EMBL AAI42334.1

Organism

Bos taurus (Bovine) [Reference proteome]

Taxonomic identifier

9913 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Deuterostomia › Chordata › Craniata › Vertebrata › Gnathostomata › Teleostomi › Euteleostomi › Sarcopterygii › Tetrapoda › Amniota › Mammalia › Theria › Eutheria › Laurasiatheria › Cetartiodactyla › Ruminantia › Pecora › Bovidae › Bovinae › Bos

Protein attributes

Sequence length	154 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	intracellular protein transport Inferred from electronic annotation. Source: InterPro vesicle-mediated transport Inferred from electronic annotation. Source: InterPro
Cellular_component	membrane coat Inferred from electronic annotation. Source: InterPro
Molecular_function	protein transporter activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A5PK31 [UniParc]. Last modified July 10, 2007. Version 1. Checksum: 577212A0723125FD	FASTA	154	18,415
	10 20 30 40 50 60 MIHFILLFSR QGKLRLQKWY TTLPDKERKK ITREIVQIIL SRGQRTSSFV DWKELKLVYK 70 80 90 100 110 120 RYASLYFCCA VENQDNELLT LEIVHRYVEL LDKYFGNVCE LDIIFNFEKA YFILDEFIIG 130 140 150 GEIQETSKKS AVKAIEDSDM LQETMEEYMN KPTF

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	Moore S., Alexander L., Brownstein M., Guan L., Lobo S., Meng Y., Tanaguchi M., Wang Z., Yu J., Prange C., Schreiber K., Shenmen C., Wagner L., Bala M., Barbazuk S., Barber S., Babakaiff R., Beland J. , Chun E., Del Rio L., Gibson S., Hanson R., Kirkpatrick R., Liu J., Matsuo C., Mayo M., Santos R.R., Stott J., Tsai M., Wong D., Siddiqui A., Holt R., Jones S.J., Marra M.A. Submitted (JUN-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: Hereford EMBL AAI42334.1. Tissue: Thymus EMBL AAI42334.1.
[2]	"A whole-genome assembly of the domestic cow, Bos taurus." Zimin A.V., Delcher A.L., Florea L., Kelley D.R., Schatz M.C., Puiu D., Hanrahan F., Pertea G., Van Tassell C.P., Sonstegard T.S., Marcais G., Roberts M., Subramanian P., Yorke J.A., Salzberg S.L. Genome Biol. 10:R42-R42(2009) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Hereford Ensembl ENSBTAP00000014784.
[3]	Ensembl Submitted (FEB-2012) to UniProtKB Cited for: IDENTIFICATION. Strain: Hereford Ensembl ENSBTAP00000014784.

Cross-references

Sequence databases
EMBL GenBank DDBJ	DAAA02006041 Genomic DNA. No translation available. BC142333 mRNA. Translation: AAI42334.1.
IPI	IPI00868488.
RefSeq	NP_001096766.1. NM_001103296.2.
UniGene	Bt.61107.
3D structure databases
SMR	A5PK31. Positions 1-146.
ModBase	Search...
Protein-protein interaction databases
STRING	9913.ENSBTAP00000014784.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
Ensembl	ENSBTAT00000014784; ENSBTAP00000014784; ENSBTAG00000011133.
GeneID	540693.
KEGG	bta:540693.
Organism-specific databases
CTD	130340.
Phylogenomic databases
eggNOG	COG5030.
GeneTree	ENSGT00530000062839.
HOGENOM	HOG000185227.
HOVERGEN	HBG050517.
InParanoid	A5PK31.
KO	K12395.
OMA	TSKKTAV.
OrthoDB	EOG469QVZ.
Family and domain databases
InterPro	IPR016635. AP_complex_ssu. IPR022775. AP_mu_sigma_su. IPR000804. Clathrin_sm-chain_CS. IPR011012. Longin-like_dom. [Graphical view]
PANTHER	PTHR11753. PTHR11753. 1 hit.
Pfam	PF01217. Clat_adaptor_s. 1 hit. [Graphical view]
PIRSF	PIRSF015588. AP_complex_sigma. 1 hit.
SUPFAM	SSF64356. Longin_like. 1 hit.
PROSITE	PS00989. CLAT_ADAPTOR_S. 1 hit. [Graphical view]
ProtoNet	Search...
Other
NextBio	20878777.

Entry information

Entry name

A5PK31_BOVIN

Accession

Primary (citable) accession number: A5PK31

Entry history

Integrated into UniProtKB/TrEMBL:	July 10, 2007
Last sequence update:	July 10, 2007
Last modified:	April 3, 2013
This is version 46 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)