A5PJZ7 (A5PJZ7_BOVIN) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
HDAC6 protein EMBL AAI42299.1

Gene names

Name:

HDAC6 EMBL AAI42299.1

Organism

Bos taurus (Bovine) EMBL AAI42299.1

Taxonomic identifier

9913 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Deuterostomia › Chordata › Craniata › Vertebrata › Gnathostomata › Teleostomi › Euteleostomi › Sarcopterygii › Tetrapoda › Amniota › Mammalia › Theria › Eutheria › Laurasiatheria › Cetartiodactyla › Ruminantia › Pecora › Bovidae › Bovinae › Bos

Protein attributes

Sequence length	1129 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

Ontologies

Keywords
Molecular function	Hydrolase SAAS SAAS000286
Gene Ontology (GO)
Molecular_function	hydrolase activity Inferred from electronic annotation. Source: UniProtKB-KW zinc ion binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A5PJZ7 [UniParc]. Last modified July 10, 2007. Version 1. Checksum: C11FD28F15597D13	FASTA	1,129	123,975
	10 20 30 40 50 60 MTSTGQDSTT PKERRSRHNP HSPTHDSSIT SKRGVKKSAI LRSSPSLAEV KKKGRMKKLS 70 80 90 100 110 120 QTAEQDLIMG LQGLNLNLES RTLSGTGLVF DEQLNEFHCL WDDSFPERPE RLHAIKEQLI 130 140 150 160 170 180 QEGLLDRCVS FQARFAEKEE LMLVHSLEYI DLMETTQYMN EEELHVLADT YDSVYLHPNS 190 200 210 220 230 240 YTCACLASGS VLRLVDAVLE AEIRNGMAII RPPGHHAQHS LMDGYCMFNH VAVAARYAQQ 250 260 270 280 290 300 KHDIQRVLIV DWDVHHGQGI QFAFDQDPSV LYFSIHRYEQ GRFWPHLKAS NWSTTGLGQG 310 320 330 340 350 360 QGYTINVPWN QVGMQDADYI AAFLHVLLPV AFEFQPQLVL VAAGFDALQG DPKGEMAATP 370 380 390 400 410 420 AGFAQLTHLL MGLAEGKLIL SLEGGYNLHS LAEGVSATLH TLLGDPCPVL ESPGAPCPSA 430 440 450 460 470 480 QASLSCTLEA LEPFWESLVR SVESLEEKDT VEKDDVEEKE EERLPQSPEL SVPIWPVLQA 490 500 510 520 530 540 RTGLVYDQQM MDHHNLWDNY HPEMPQRIHF IMHHLDELGL AKRCHSLPAR PATDAELLTC 550 560 570 580 590 600 HSAEHLERLR ATEKMKTREL RREGANYDSI YICSSTFACA QLAAGAACRL VEAVLAGEVL 610 620 630 640 650 660 NGVAVVRPPG HHAEPDAACG FCFFNSVAVA ARHAQAISGH ALRILIVDWD IHHGNGTQHI 670 680 690 700 710 720 FEEDPSVLYI SLHRYDHGTF FPMGNEGACT RIGKATGTGF TVNVAWNGPR MGDADYLAAW 730 740 750 760 770 780 HRLVLPVAYE FNPELVLVSA GFDAARGDPL GGCQVSPEGY AHLTHQLMGL ANGHIILILE 790 800 810 820 830 840 GGYNLTSISE SMAACTRSLL GDPLPLLTRL RPPLSGAQAS ITKTIQVHRR YWRSLRVMKR 850 860 870 880 890 900 KNKEELSSSK LITKKPSQPA SPGLANVTTT VEGNILETGM GQAASEASVK ESTPDQTESA 910 920 930 940 950 960 TAPVELTQGQ SSDTATQGAA LDQTISEGAT GGAELIQNPP ASCINNRIPP ALPVQGATAQ 970 980 990 1000 1010 1020 TSPSKLMANL RILDLDSTTQ EPSEEEGLLG EAAGGQDTNE SVPVQVFGDH ADTDEVMFYA 1030 1040 1050 1060 1070 1080 VRPLLWCPHL AAVCPIPETG LNVTQPCQYC GTLQENWVCL SCYQVYCGRY INAHMLQHHE 1090 1100 1110 1120 GSGHPLVLSY ADLSAWCYHC QAYVHHKDLL AVKNIAHQNK FGEDIPHSD

References

[1]

Moore S., Alexander L., Brownstein M., Guan L., Lobo S., Meng Y., Tanaguchi M., Wang Z., Yu J., Prange C., Schreiber K., Shenmen C., Wagner L., Bala M., Barbazuk S., Barber S., Babakaiff R., Beland J. , Chun E., Del Rio L., Gibson S., Hanson R., Kirkpatrick R., Liu J., Matsuo C., Mayo M., Santos R.R., Stott J., Tsai M., Wong D., Siddiqui A., Holt R., Jones S.J., Marra M.A. Submitted (JUN-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: Hereford EMBL AAI42299.1. Tissue: Thymus EMBL AAI42299.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	BC142298 mRNA. Translation: AAI42299.1.
IPI	IPI00713432.
RefSeq	NP_001092430.1. NM_001098960.1.
UniGene	Bt.76413.
3D structure databases
ProteinModelPortal	A5PJZ7.
SMR	A5PJZ7. Positions 1023-1127.
ModBase	Search...
Protein-protein interaction databases
STRING	9913.ENSBTAP00000050519.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	513602.
KEGG	bta:513602.
Organism-specific databases
CTD	10013.
Phylogenomic databases
eggNOG	COG0123.
HOGENOM	HOG000004769.
HOVERGEN	HBG051894.
KO	K11407.
OrthoDB	EOG40P464.
Family and domain databases
Gene3D	3.30.40.10. 1 hit. 3.40.800.20. 2 hits.
InterPro	IPR000286. His_deacetylse. IPR023801. His_deacetylse_dom. IPR013083. Znf_RING/FYVE/PHD. IPR001607. Znf_UBP. [Graphical view]
PANTHER	PTHR10625. PTHR10625. 1 hit.
Pfam	PF00850. Hist_deacetyl. 2 hits. PF02148. zf-UBP. 1 hit. [Graphical view]
PRINTS	PR01270. HDASUPER.
SMART	SM00290. ZnF_UBP. 1 hit. [Graphical view]
PROSITE	PS50271. ZF_UBP. 1 hit. [Graphical view]
ProtoNet	Search...
Other
NextBio	20870941.

Entry information

Entry name

A5PJZ7_BOVIN

Accession

Primary (citable) accession number: A5PJZ7

Entry history

Integrated into UniProtKB/TrEMBL:	July 10, 2007
Last sequence update:	July 10, 2007
Last modified:	April 3, 2013
This is version 39 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)