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A5PJL1

- PXMP4_BOVIN

UniProt

A5PJL1 - PXMP4_BOVIN

Protein

Peroxisomal membrane protein 4

Gene

PXMP4

Organism
Bos taurus (Bovine)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 47 (01 Oct 2014)
      Sequence version 1 (10 Jul 2007)
      Previous versions | rss
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    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Peroxisomal membrane protein 4
    Gene namesi
    Name:PXMP4
    OrganismiBos taurus (Bovine)
    Taxonomic identifieri9913 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaCetartiodactylaRuminantiaPecoraBovidaeBovinaeBos
    ProteomesiUP000009136: Chromosome 13

    Subcellular locationi

    GO - Cellular componenti

    1. integral component of membrane Source: UniProtKB-KW
    2. peroxisomal membrane Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    Membrane, Peroxisome

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Initiator methioninei1 – 11RemovedBy similarity
    Chaini2 – 212211Peroxisomal membrane protein 4PRO_0000317317Add
    BLAST

    Amino acid modifications

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Glycosylationi206 – 2061N-linked (GlcNAc...)Sequence Analysis

    Keywords - PTMi

    Glycoprotein

    Interactioni

    Subunit structurei

    Interacts with PEX19.By similarity

    Protein-protein interaction databases

    STRINGi9913.ENSBTAP00000051908.

    Structurei

    Transmembrane

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Transmembranei97 – 11721HelicalSequence AnalysisAdd
    BLAST
    Transmembranei153 – 17321HelicalSequence AnalysisAdd
    BLAST

    Family & Domainsi

    Sequence similaritiesi

    Keywords - Domaini

    Transmembrane, Transmembrane helix

    Phylogenomic databases

    eggNOGiNOG79127.
    GeneTreeiENSGT00390000001562.
    HOGENOMiHOG000157771.
    HOVERGENiHBG053773.
    InParanoidiA5PJL1.
    KOiK13350.
    OMAiQATYTHS.
    OrthoDBiEOG7NSB3Q.
    TreeFamiTF105313.

    Family and domain databases

    InterProiIPR019531. Pmp4.
    IPR003397. Tim17/Tim22/Tim23/PMP24.
    [Graphical view]
    PfamiPF02466. Tim17. 1 hit.
    [Graphical view]
    PIRSFiPIRSF013674. PXMP4. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    A5PJL1-1 [UniParc]FASTAAdd to Basket

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    MVAPPQLRAL LFAINALLSK RRYHAALAML KGFRNGAVYG AKIRAPHALV    50
    MTFLFRSGSL REKLRAILQA TYTHSWNLAR FVFLYKGLCA LQSHVQGKTY 100
    QAHSFVSAFI GGLLVFGNNN NINSQISMYL LSRVLFALCR LGVEKGFIPE 150
    PRLDPFPWFS GLVWGLVLWL FEYHRPTLQP SLQSSMTYLY EDSNVWHDLS 200
    DFFIYNKSQP SK 212
    Length:212
    Mass (Da):24,224
    Last modified:July 10, 2007 - v1
    Checksum:iC8318CECBC6F8911
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BC142155 mRNA. Translation: AAI42156.1.
    RefSeqiNP_001092633.1. NM_001099163.1.
    UniGeneiBt.61975.

    Genome annotation databases

    EnsembliENSBTAT00000053065; ENSBTAP00000051908; ENSBTAG00000038738.
    GeneIDi617160.
    KEGGibta:617160.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BC142155 mRNA. Translation: AAI42156.1 .
    RefSeqi NP_001092633.1. NM_001099163.1.
    UniGenei Bt.61975.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 9913.ENSBTAP00000051908.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENSBTAT00000053065 ; ENSBTAP00000051908 ; ENSBTAG00000038738 .
    GeneIDi 617160.
    KEGGi bta:617160.

    Organism-specific databases

    CTDi 11264.

    Phylogenomic databases

    eggNOGi NOG79127.
    GeneTreei ENSGT00390000001562.
    HOGENOMi HOG000157771.
    HOVERGENi HBG053773.
    InParanoidi A5PJL1.
    KOi K13350.
    OMAi QATYTHS.
    OrthoDBi EOG7NSB3Q.
    TreeFami TF105313.

    Miscellaneous databases

    NextBioi 20900517.

    Family and domain databases

    InterProi IPR019531. Pmp4.
    IPR003397. Tim17/Tim22/Tim23/PMP24.
    [Graphical view ]
    Pfami PF02466. Tim17. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF013674. PXMP4. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. NIH - Mammalian Gene Collection (MGC) project
      Submitted (JUN-2007) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
      Strain: Hereford.
      Tissue: Fetal muscle.

    Entry informationi

    Entry nameiPXMP4_BOVIN
    AccessioniPrimary (citable) accession number: A5PJL1
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: February 5, 2008
    Last sequence update: July 10, 2007
    Last modified: October 1, 2014
    This is version 47 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programChordata Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3