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A5PJL1

- PXMP4_BOVIN

UniProt

A5PJL1 - PXMP4_BOVIN

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Protein

Peroxisomal membrane protein 4

Gene

PXMP4

Organism
Bos taurus (Bovine)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at transcript leveli

Names & Taxonomyi

Protein namesi
Recommended name:
Peroxisomal membrane protein 4
Gene namesi
Name:PXMP4
OrganismiBos taurus (Bovine)
Taxonomic identifieri9913 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaCetartiodactylaRuminantiaPecoraBovidaeBovinaeBos
ProteomesiUP000009136: Chromosome 13

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei97 – 11721HelicalSequence AnalysisAdd
BLAST
Transmembranei153 – 17321HelicalSequence AnalysisAdd
BLAST

GO - Cellular componenti

  1. integral component of membrane Source: UniProtKB-KW
  2. peroxisome Source: UniProtKB-KW
Complete GO annotation...

Keywords - Cellular componenti

Membrane, Peroxisome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Initiator methioninei1 – 11RemovedBy similarity
Chaini2 – 212211Peroxisomal membrane protein 4PRO_0000317317Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Glycosylationi206 – 2061N-linked (GlcNAc...)Sequence Analysis

Keywords - PTMi

Glycoprotein

Interactioni

Subunit structurei

Interacts with PEX19.By similarity

Protein-protein interaction databases

STRINGi9913.ENSBTAP00000051908.

Family & Domainsi

Sequence similaritiesi

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiNOG79127.
GeneTreeiENSGT00390000001562.
HOGENOMiHOG000157771.
HOVERGENiHBG053773.
InParanoidiA5PJL1.
KOiK13350.
OMAiQATYTHS.
OrthoDBiEOG7NSB3Q.
TreeFamiTF105313.

Family and domain databases

InterProiIPR019531. Pmp4.
IPR003397. Tim17/Tim22/Tim23/PMP24.
[Graphical view]
PfamiPF02466. Tim17. 1 hit.
[Graphical view]
PIRSFiPIRSF013674. PXMP4. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

A5PJL1-1 [UniParc]FASTAAdd to Basket

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        10         20         30         40         50
MVAPPQLRAL LFAINALLSK RRYHAALAML KGFRNGAVYG AKIRAPHALV
60 70 80 90 100
MTFLFRSGSL REKLRAILQA TYTHSWNLAR FVFLYKGLCA LQSHVQGKTY
110 120 130 140 150
QAHSFVSAFI GGLLVFGNNN NINSQISMYL LSRVLFALCR LGVEKGFIPE
160 170 180 190 200
PRLDPFPWFS GLVWGLVLWL FEYHRPTLQP SLQSSMTYLY EDSNVWHDLS
210
DFFIYNKSQP SK
Length:212
Mass (Da):24,224
Last modified:July 10, 2007 - v1
Checksum:iC8318CECBC6F8911
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC142155 mRNA. Translation: AAI42156.1.
RefSeqiNP_001092633.1. NM_001099163.1.
UniGeneiBt.61975.

Genome annotation databases

EnsembliENSBTAT00000053065; ENSBTAP00000051908; ENSBTAG00000038738.
GeneIDi617160.
KEGGibta:617160.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC142155 mRNA. Translation: AAI42156.1 .
RefSeqi NP_001092633.1. NM_001099163.1.
UniGenei Bt.61975.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 9913.ENSBTAP00000051908.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENSBTAT00000053065 ; ENSBTAP00000051908 ; ENSBTAG00000038738 .
GeneIDi 617160.
KEGGi bta:617160.

Organism-specific databases

CTDi 11264.

Phylogenomic databases

eggNOGi NOG79127.
GeneTreei ENSGT00390000001562.
HOGENOMi HOG000157771.
HOVERGENi HBG053773.
InParanoidi A5PJL1.
KOi K13350.
OMAi QATYTHS.
OrthoDBi EOG7NSB3Q.
TreeFami TF105313.

Miscellaneous databases

NextBioi 20900517.

Family and domain databases

InterProi IPR019531. Pmp4.
IPR003397. Tim17/Tim22/Tim23/PMP24.
[Graphical view ]
Pfami PF02466. Tim17. 1 hit.
[Graphical view ]
PIRSFi PIRSF013674. PXMP4. 1 hit.
ProtoNeti Search...

Publicationsi

  1. NIH - Mammalian Gene Collection (MGC) project
    Submitted (JUN-2007) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: Hereford.
    Tissue: Fetal muscle.

Entry informationi

Entry nameiPXMP4_BOVIN
AccessioniPrimary (citable) accession number: A5PJL1
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 5, 2008
Last sequence update: July 10, 2007
Last modified: October 29, 2014
This is version 48 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3