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Protein

Peroxisomal membrane protein 4

Gene

PXMP4

Organism
Bos taurus (Bovine)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Names & Taxonomyi

Protein namesi
Recommended name:
Peroxisomal membrane protein 4
Gene namesi
Name:PXMP4
OrganismiBos taurus (Bovine)
Taxonomic identifieri9913 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaCetartiodactylaRuminantiaPecoraBovidaeBovinaeBos
Proteomesi
  • UP000009136 Componenti: Chromosome 13

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei97 – 117HelicalSequence analysisAdd BLAST21
Transmembranei153 – 173HelicalSequence analysisAdd BLAST21

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane, Peroxisome

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Initiator methionineiRemovedBy similarity
ChainiPRO_00003173172 – 212Peroxisomal membrane protein 4Add BLAST211

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Glycosylationi206N-linked (GlcNAc...)Sequence analysis1

Keywords - PTMi

Glycoprotein

Proteomic databases

PaxDbiA5PJL1.
PRIDEiA5PJL1.

Expressioni

Gene expression databases

BgeeiENSBTAG00000038738.

Interactioni

Subunit structurei

Interacts with PEX19.By similarity

Protein-protein interaction databases

STRINGi9913.ENSBTAP00000051908.

Family & Domainsi

Sequence similaritiesi

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiENOG410IIYG. Eukaryota.
ENOG410ZE52. LUCA.
GeneTreeiENSGT00390000001562.
HOGENOMiHOG000157771.
HOVERGENiHBG053773.
InParanoidiA5PJL1.
KOiK13350.
OMAiYTHSRNL.
OrthoDBiEOG091G0K56.
TreeFamiTF105313.

Family and domain databases

InterProiIPR019531. Pmp4.
IPR003397. Tim17/Tim22/Tim23/PMP24.
[Graphical view]
PfamiPF02466. Tim17. 1 hit.
[Graphical view]
PIRSFiPIRSF013674. PXMP4. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

A5PJL1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVAPPQLRAL LFAINALLSK RRYHAALAML KGFRNGAVYG AKIRAPHALV
60 70 80 90 100
MTFLFRSGSL REKLRAILQA TYTHSWNLAR FVFLYKGLCA LQSHVQGKTY
110 120 130 140 150
QAHSFVSAFI GGLLVFGNNN NINSQISMYL LSRVLFALCR LGVEKGFIPE
160 170 180 190 200
PRLDPFPWFS GLVWGLVLWL FEYHRPTLQP SLQSSMTYLY EDSNVWHDLS
210
DFFIYNKSQP SK
Length:212
Mass (Da):24,224
Last modified:July 10, 2007 - v1
Checksum:iC8318CECBC6F8911
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC142155 mRNA. Translation: AAI42156.1.
RefSeqiNP_001092633.1. NM_001099163.1.
UniGeneiBt.61975.

Genome annotation databases

EnsembliENSBTAT00000053065; ENSBTAP00000051908; ENSBTAG00000038738.
GeneIDi617160.
KEGGibta:617160.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC142155 mRNA. Translation: AAI42156.1.
RefSeqiNP_001092633.1. NM_001099163.1.
UniGeneiBt.61975.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi9913.ENSBTAP00000051908.

Proteomic databases

PaxDbiA5PJL1.
PRIDEiA5PJL1.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSBTAT00000053065; ENSBTAP00000051908; ENSBTAG00000038738.
GeneIDi617160.
KEGGibta:617160.

Organism-specific databases

CTDi11264.

Phylogenomic databases

eggNOGiENOG410IIYG. Eukaryota.
ENOG410ZE52. LUCA.
GeneTreeiENSGT00390000001562.
HOGENOMiHOG000157771.
HOVERGENiHBG053773.
InParanoidiA5PJL1.
KOiK13350.
OMAiYTHSRNL.
OrthoDBiEOG091G0K56.
TreeFamiTF105313.

Gene expression databases

BgeeiENSBTAG00000038738.

Family and domain databases

InterProiIPR019531. Pmp4.
IPR003397. Tim17/Tim22/Tim23/PMP24.
[Graphical view]
PfamiPF02466. Tim17. 1 hit.
[Graphical view]
PIRSFiPIRSF013674. PXMP4. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiPXMP4_BOVIN
AccessioniPrimary (citable) accession number: A5PJL1
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 5, 2008
Last sequence update: July 10, 2007
Last modified: October 5, 2016
This is version 54 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.