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A5PJL1 (PXMP4_BOVIN) Reviewed, UniProtKB/Swiss-Prot

Last modified May 14, 2014. Version 46. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Peroxisomal membrane protein 4
Gene names
Name:PXMP4
OrganismBos taurus (Bovine) [Reference proteome]
Taxonomic identifier9913 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaCetartiodactylaRuminantiaPecoraBovidaeBovinaeBos

Protein attributes

Sequence length212 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceEvidence at transcript level

General annotation (Comments)

Subunit structure

Interacts with PEX19 By similarity.

Subcellular location

Peroxisome membrane; Multi-pass membrane protein By similarity.

Sequence similarities

Belongs to the peroxisomal membrane protein PXMP2/4 family.

Ontologies

Keywords
   Cellular componentMembrane
Peroxisome
   DomainTransmembrane
Transmembrane helix
   PTMGlycoprotein
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Cellular_componentintegral component of membrane

Inferred from electronic annotation. Source: UniProtKB-KW

peroxisomal membrane

Inferred from electronic annotation. Source: UniProtKB-SubCell

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Initiator methionine11Removed By similarity
Chain2 – 212211Peroxisomal membrane protein 4
PRO_0000317317

Regions

Transmembrane97 – 11721Helical; Potential
Transmembrane153 – 17321Helical; Potential

Amino acid modifications

Glycosylation2061N-linked (GlcNAc...) Potential

Sequences

Sequence LengthMass (Da)Tools
A5PJL1 [UniParc].

Last modified July 10, 2007. Version 1.
Checksum: C8318CECBC6F8911

FASTA21224,224
        10         20         30         40         50         60 
MVAPPQLRAL LFAINALLSK RRYHAALAML KGFRNGAVYG AKIRAPHALV MTFLFRSGSL 

        70         80         90        100        110        120 
REKLRAILQA TYTHSWNLAR FVFLYKGLCA LQSHVQGKTY QAHSFVSAFI GGLLVFGNNN 

       130        140        150        160        170        180 
NINSQISMYL LSRVLFALCR LGVEKGFIPE PRLDPFPWFS GLVWGLVLWL FEYHRPTLQP 

       190        200        210 
SLQSSMTYLY EDSNVWHDLS DFFIYNKSQP SK 

« Hide

References

[1]NIH - Mammalian Gene Collection (MGC) project
Submitted (JUN-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Strain: Hereford.
Tissue: Fetal muscle.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
BC142155 mRNA. Translation: AAI42156.1.
RefSeqNP_001092633.1. NM_001099163.1.
UniGeneBt.61975.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING9913.ENSBTAP00000051908.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENSBTAT00000053065; ENSBTAP00000051908; ENSBTAG00000038738.
GeneID617160.
KEGGbta:617160.

Organism-specific databases

CTD11264.

Phylogenomic databases

eggNOGNOG79127.
GeneTreeENSGT00390000001562.
HOGENOMHOG000157771.
HOVERGENHBG053773.
InParanoidA5PJL1.
KOK13350.
OMAQATYTHS.
OrthoDBEOG7NSB3Q.
TreeFamTF105313.

Family and domain databases

InterProIPR019531. Pmp4.
IPR003397. Tim17/Tim22/Tim23/PMP24.
[Graphical view]
PfamPF02466. Tim17. 1 hit.
[Graphical view]
PIRSFPIRSF013674. PXMP4. 1 hit.
ProtoNetSearch...

Other

NextBio20900517.

Entry information

Entry namePXMP4_BOVIN
AccessionPrimary (citable) accession number: A5PJL1
Entry history
Integrated into UniProtKB/Swiss-Prot: February 5, 2008
Last sequence update: July 10, 2007
Last modified: May 14, 2014
This is version 46 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families