A5N6W5 (A5N6W5_CLOK5) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Predicted glycosyl hydrolase EMBL EDK33046.1

Gene names

Ordered Locus Names:

CKL_1004

Organism

Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) [Complete proteome] [HAMAP]

Taxonomic identifier

431943 [NCBI]

Taxonomic lineage

Bacteria › Firmicutes › Clostridia › Clostridiales › Clostridiaceae › Clostridium

Protein attributes

Sequence length	432 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the glycosyl hydrolase 18 family. RuleBase RU004453

Ontologies

Keywords
Molecular function	Hydrolase EMBL EDK33046.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	cell wall macromolecule catabolic process Inferred from electronic annotation. Source: InterPro chitin catabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	cation binding Inferred from electronic annotation. Source: InterPro chitinase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A5N6W5 [UniParc]. Last modified July 10, 2007. Version 1. Checksum: 3148539253D8FEA6	FASTA	432	48,530
	10 20 30 40 50 60 MNIHVVRPGD SIWSIARRFG VTPDSIIDAN GIEPQLSLVV GESLVIPTKE RAYRVRPGDS 70 80 90 100 110 120 LWSISERFGV SVNSIAQLNN ISDPSAIYPG MVLRIPDKSK NYGVIETNGF IQPSNVDRET 130 140 150 160 170 180 RIVNDAAPYL TYITPFSHHV TAEGGLTPLR DETIISLARN NRVAPLLSVT NLSGANFDTE 190 200 210 220 230 240 LIGNILNNEN LQNTLINNII NTMDKKSYYG VIVDFERIPP SDREEYNNFL RKLVSRAHPL 250 260 270 280 290 300 GYVVGTALAP KTYDVTVGAW HGAHDYRAHG EIVDFVIIMT YEWGWSGGPP MAVAPINEVR 310 320 330 340 350 360 KVINYAVSVI PPKKIMMGVP LYGYDWTLPY TPGGEFAESI GNQEAVNRAR RYGAQIKYDT 370 380 390 400 410 420 KAESPYYNYI DEEGREHVVW FEDARSMEAK YKLVNEYGLR GVSFWQLGKA FPQNWRILDN 430 MFQITKVIPP VS

References

[1]

"The genome of Clostridium kluyveri, a strict anaerobe with unique metabolic features." Seedorf H., Fricke W.F., Veith B., Brueggemann H., Liesegang H., Strittmatter A., Miethke M., Buckel W., Hinderberger J., Li F., Hagemeier C., Thauer R.K., Gottschalk G. Proc. Natl. Acad. Sci. U.S.A. 105:2128-2133(2008) [PubMed: 18218779] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000673 Genomic DNA. Translation: EDK33046.1.
RefSeq	YP_001394394.1. NC_009706.1.
3D structure databases
ProteinModelPortal	A5N6W5.
ModBase	Search...
Protein-protein interaction databases
STRING	A5N6W5.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5392498.
GenomeReviews	Gene locus CKL_1004 in contig CP000673_GR.
KEGG	ckl:CKL_1004.
NMPDR	fig|431943.4.peg.1047.
PATRIC	19463451. VBICloKlu111549_1060.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG3858.
HOGENOM	HBG337948.
OMA	WYEAHDY.
ProtClustDB	CLSK2393325.
Family and domain databases
InterPro	IPR011583. Chitinase_II. IPR001223. Glyco_hydro18cat. IPR013781. Glyco_hydro_subgr_catalytic. IPR017853. Glycoside_hydrolase_SF. IPR018392. Peptidoglycan-bd_lysin. IPR002482. Peptidoglycan-bd_Lysin_subgr. [Graphical view]
Gene3D	G3DSA:3.20.20.80. Glyco_hydro_cat. 2 hits.
KO	K06306.
Pfam	PF00704. Glyco_hydro_18. 1 hit. PF01476. LysM. 2 hits. [Graphical view]
SMART	SM00636. Glyco_18. 1 hit. SM00257. LysM. 2 hits. [Graphical view]
SUPFAM	SSF51445. Glyco_hydro_cat. 1 hit.
ProtoNet	Search...

Entry information

Entry name

A5N6W5_CLOK5

Accession

Primary (citable) accession number: A5N6W5

Entry history

Integrated into UniProtKB/TrEMBL:	July 10, 2007
Last sequence update:	July 10, 2007
Last modified:	December 14, 2011
This is version 29 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)