A5N5T2 (A5N5T2_CLOK5) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
NdvB EMBL EDK32663.1

Gene names

Name:	ndvB EMBL EDK32663.1
Ordered Locus Names:	CKL_0609

Organism

Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) [Complete proteome] [HAMAP]

Taxonomic identifier

431943 [NCBI]

Taxonomic lineage

Bacteria › Firmicutes › Clostridia › Clostridiales › Clostridiaceae › Clostridium

Protein attributes

Sequence length	2886 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	carbohydrate binding Inferred from electronic annotation. Source: InterPro catalytic activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A5N5T2 [UniParc]. Last modified July 10, 2007. Version 1. Checksum: CEF0A76DEE79CDAF	FASTA	2,886	333,001
	10 20 30 40 50 60 MKVQFFFTRK DGFFMLYVIG IAIIIFLAMI YKNLNKCVDV DENMVDDIPT LNLGKEELKK 70 80 90 100 110 120 YAREISIIPA QVKKRSCKKK LIDSLDKNYK NILHGYNFFN MEIKNRGDIV FCAEWLLDNL 130 140 150 160 170 180 YLIKKEYKDI KTNMPGDYYK NLPVITKGAM KGYPRIYYIA REMLQCSYGT VSEEAIETFI 190 200 210 220 230 240 SAYEENTVLK SCELWALPIM LRIALIQNIS NITENIVFMQ KERKRAESVA EGIINSGSNI 250 260 270 280 290 300 DFEIERFRRD RIKFTSPFTE RFIKILRDNF IDSVKVYDWI DEELDKEDSS AARAVNINHQ 310 320 330 340 350 360 KQAVYQVSME NSINGIREVC ALNWKENFER LSYVEQVLRK DPAGVYELMD FNSRDYYRHK 370 380 390 400 410 420 VEKLSKKINV PESFIARKAV ECAEEASGEV YEKHVGYYLI DKGISCLKKK IKSSGEEYKK 430 440 450 460 470 480 VNSEIGTNIT VDLYIGTIIF GTIFLDLLIN GMNFYGQNLP IWKYIAAAVI LLIPSSEIFI 490 500 510 520 530 540 SIFNWSINKL VETRFIPKME FKQGIPQEFS TVVVIPALIN NVDRLKSLIS DLEVYYLANE 550 560 570 580 590 600 EQNLYFALLG DFKDSFYEEE SGDKLIVKIA LEEIKSLNKK YGNGDRDKFY FLSRYRKYNE 610 620 630 640 650 660 KEQKWIGWER KRGKLMEFNS LVRGNKNTSY NVISGDITSL CDAKYVITLD ADTKLPKDTA 670 680 690 700 710 720 KLLIGAMSHP LNIPYVDKNN KKVLRGHGLM QPRVSVGVLS ANKTVYSNIF SGETGIDIYT 730 740 750 760 770 780 SAISDVYEDL FDEGIFTGKG IYDIDVFNDI LQDEIPENTV LSHDLLEGSY VRAGLVTDIE 790 800 810 820 830 840 LIDGYPAYYD SSCKRLHRWV RGDWQLLPWL FKKNSLNKLS KWKIIDNLRR SAVSPAVIIL 850 860 870 880 890 900 IIGALTLFSN SDNLLLIALI SLLCPIFFDV SETVVSPVKG ISLSGKVSNF KVAIEQFFLI 910 920 930 940 950 960 LSFLPYQAYL MLDAIVRTLY RVFISGRNLL QWQTAADVEA ASKKEFSHYL KTMWIGSVIA 970 980 990 1000 1010 1020 IAIGLLGFMN SLETAFLVLP FCVVWFFSPW IAFNISEDRN NDKEEQINDE DRKLLRELGR 1030 1040 1050 1060 1070 1080 KTWAYFEDFI TSETNWLSPD NYQEKPYKGI AYRTSPTNMA MGITSNVVAY DLGYISISEF 1090 1100 1110 1120 1130 1140 QYRLHNILSN MESLEKYKGH FYNWYDIKNK KPLYPRYVST VDSGNLVGYI WLVEESLDEY 1150 1160 1170 1180 1190 1200 MGYPLINKNL PLGLKDTLKL AEDEIYKELK IKQVYRSFID RLSSDDLNKF EGEDEINIFL 1210 1220 1230 1240 1250 1260 LRLFLYELIK KSMEFDKKSI KLYWNMKVYN MCIKFLEELN NVFPCIAFID EEPQFKDLKH 1270 1280 1290 1300 1310 1320 RFNDLAAKVP LEEVPAAVDE LINEFAHQKE NNNVNALKEL LLQTKSNVEK IIFEIKTIKN 1330 1340 1350 1360 1370 1380 TLSNMGKEHN FSMLYNKKRQ LFAIGYDVEK DTLGKNYYDL LASEARQASF VAIAKGEVEQ 1390 1400 1410 1420 1430 1440 AHWFNLGRAM TSVGGGKGLV SWSGTMFEYL MPLIIMKKFP DTLFSETYEY IVEVQKNYGD 1450 1460 1470 1480 1490 1500 KKHVPWGISE SAYYDFDINS IYQYKAFGVP GIGLKRGLTN ELVVSPYASV MALQVDFKNA 1510 1520 1530 1540 1550 1560 LKNIKRLIEL KVEGIYGFYD AIDYTCERLS KGRKSAIVNC FMIHHQGMSF MSLDNVLMKN 1570 1580 1590 1600 1610 1620 ILQERFHRIP RVKSVELLLQ EKVPKSIIYN REEHSKEAKP LFKEENMVGR KYTTAVTKAP 1630 1640 1650 1660 1670 1680 ETNIISNGNY YLMMTNSGSG YSKRKDIMVY RWREDVTTDN TGMFFYIKNI NSNEYWSATF 1690 1700 1710 1720 1730 1740 EPCKHEGEDY EVIFLPDKCE FKRKDGNLRT YTEVTVSQED EGEVRRISIT NSSNYKREVE 1750 1760 1770 1780 1790 1800 ITSYLEVTLA PYNADLVHPA FGNLFIETEF VQEPMCIIAS RRPKSKEEKL WLMQTIAIEG 1810 1820 1830 1840 1850 1860 KQIGSVQYET SRVNFIGRNR NLMNPRAMDN DAQLTKSIGA VIDPIISMRV RVVIEPGKTC 1870 1880 1890 1900 1910 1920 RVAYSTVTAN SKEKAIELAN KYRNMSNIDR IFQLSWTEVQ LEMKYLGIKS NQANMYQKMA 1930 1940 1950 1960 1970 1980 SRILFINGLF KDRYEYITKV KQGQSALWPY GISGDLPIVL LIIRDEKHME LVRQLVNAHE 1990 2000 2010 2020 2030 2040 YWSLKGLSVD LVLLNLQDTS YVQLLQDKIR DTVNSRRAAR KNVPGGIYIY NNSTINRRDI 2050 2060 2070 2080 2090 2100 EFFIAVSRIV IDAEKGEFLK HIKDTEGKRA AYGNISNRYK NNTSNYSFKI PELQYFNDIG 2110 2120 2130 2140 2150 2160 GFSKDGKSYF IILKNYNNTP APWINVISNK KFGFHISENG VSYTWNKNSR ENKLTTWSND 2170 2180 2190 2200 2210 2220 PVVDGEAEAL YIKDEVTKQI WSISPKPIRD SGEYIIEHGF GFSTFKHEAN EILGEMTVFA 2230 2240 2250 2260 2270 2280 DIEHSVKICR VKLKNMGVVK RKLSLTYYAK LVLGVCHEQT AQYIYTGFNS REEYIYAVNP 2290 2300 2310 2320 2330 2340 YSECFGRGIC YMKILGGKDS SYTSSREEFI GRGGDVSKPK GLGYESFSGK IGAGFDPCFA 2350 2360 2370 2380 2390 2400 ENTRIELNEN DESEILILLG QEDSFEEISK VIEKYSSVEI WLEELSKVKH YWERMFNVIQ 2410 2420 2430 2440 2450 2460 VTTPDNSMNI MLNGWLMYQV VACRYFARTA FYQSGGAYGF RDQLQDVMAI CYLNPDITRE 2470 2480 2490 2500 2510 2520 HILYSASRQY LEGDVQHWWH PYVESGIRTR FSDDLLWMPY VVADYVQNTG DYSILDEEVL 2530 2540 2550 2560 2570 2580 YLEDEQLKEG EDERYKISSV SNKKGNIYEH CIKAIERSLK FGPHNIPLMG SGDWNDGMST 2590 2600 2610 2620 2630 2640 VGNKGQGESV WLGWFLYSIL DKFQSICKFK RDDKRSDEYL KLKEFIRENI ETNAWDGSWY 2650 2660 2670 2680 2690 2700 RRAYFDNGIP LGSVENDECQ IDSISQSWAV ISGAAKESRA REAVDALERN LIREDKGVML 2710 2720 2730 2740 2750 2760 LLTPAFDKSA LEPGYIKGYI PGVRENGGQY THAAIWSVLA LAKICHNDRA YKAFSMINPI 2770 2780 2790 2800 2810 2820 NHTKTYLNCE VYKVEPYVMA ADVYAVDSHV GRGGWSWYTG AAGWMYRTGI ETILGLKLNE 2830 2840 2850 2860 2870 2880 NYGFTISPCI PTSWKGYTIK YTRGQCIYNI KVERNSEVGI WLDGNMIHNK IVPFLNEGEH EVKVNI

References

[1]

"The genome of Clostridium kluyveri, a strict anaerobe with unique metabolic features." Seedorf H., Fricke W.F., Veith B., Brueggemann H., Liesegang H., Strittmatter A., Miethke M., Buckel W., Hinderberger J., Li F., Hagemeier C., Thauer R.K., Gottschalk G. Proc. Natl. Acad. Sci. U.S.A. 105:2128-2133(2008) [PubMed: 18218779] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000673 Genomic DNA. Translation: EDK32663.1.
RefSeq	YP_001394011.1. NC_009706.1.
3D structure databases
ProteinModelPortal	A5N5T2.
ModBase	Search...
Protein-protein interaction databases
STRING	A5N5T2.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5391938.
GenomeReviews	Gene locus CKL_0609 in contig CP000673_GR.
KEGG	ckl:CKL_0609.
NMPDR	fig|431943.4.peg.646.
PATRIC	19462645. VBICloKlu111549_0669.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG3459.
HOGENOM	HBG294780.
OMA	GGDWNDG.
ProtClustDB	CLSK882486.
Family and domain databases
InterPro	IPR008928. 6-hairpin_glycosidase-like. IPR009342. Carb-bd_put_dom. IPR019282. DUF2329. IPR011013. Glyco_hydro-type_carb-bd. IPR010383. Glyco_transf_36. IPR010403. GT36_AF. [Graphical view]
Pfam	PF06204. CBM_X. 2 hits. PF10091. DUF2329. 1 hit. PF06165. Glyco_transf_36. 2 hits. PF06205. GT36_AF. 2 hits. [Graphical view]
SMART	SM01068. CBM_X. 2 hits. [Graphical view]
SUPFAM	SSF74650. Gal_mut_like. 2 hits. SSF48208. Glyco_trans_6hp. 1 hit.
ProtoNet	Search...

Entry information

Entry name

A5N5T2_CLOK5

Accession

Primary (citable) accession number: A5N5T2

Entry history

Integrated into UniProtKB/TrEMBL:	July 10, 2007
Last sequence update:	July 10, 2007
Last modified:	January 25, 2012
This is version 28 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)