A5N1R2 (A5N1R2_CLOK5) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Glutamate dehydrogenase PIRNR PIRNR000185

Gene names

Name:	gdh EMBL EDK35058.1
Ordered Locus Names:	CKL_3050

Organism

Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) [Complete proteome] [HAMAP]

Taxonomic identifier

431943 [NCBI]

Taxonomic lineage

Bacteria › Firmicutes › Clostridia › Clostridiales › Clostridiaceae › Clostridium

Protein attributes

Sequence length	443 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the Glu/Leu/Phe/Val dehydrogenases family. RuleBase RU004417 PIRNR PIRNR000185

Ontologies

Keywords
Molecular function	Oxidoreductase PIRNR PIRNR000185 EMBL EDK35058.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	cellular amino acid metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	nucleotide binding Inferred from electronic annotation. Source: InterPro oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Sites
	Active site	125	1	By similarity PIRSR PIRSR000185-1

Sequences

	Sequence		Length	Mass (Da)
	A5N1R2 [UniParc]. Last modified July 10, 2007. Version 1. Checksum: F7A5F39A77B9D7A1	FASTA	443	48,815
	10 20 30 40 50 60 MSYVDSVLEE LIKKDAPQKE FIQAVTEVLN SIRPVIDSNS HFKEMGLLER IVEPERVLMF 70 80 90 100 110 120 RVPWMDDNKK VRVNRGFRVQ FNSAIGPYKG GLRFHPSVNL SIIKFLGFEQ IFKNSLTGMP 130 140 150 160 170 180 IGGGKGGADF DPKGKSDHEI MVFCQSFMTE LFHHIGPDTD VPAGDIGVGS REIGYLYGQY 190 200 210 220 230 240 KRLTNRFHGV LTGKGLTYGG SLARTQATGY GVIYFAEEML KIKNDSIKNK KIIISGSGNV 250 260 270 280 290 300 AIYAAEKAAA LDGKVIALSD STGWIYDKEG IDLETVKKIK LVNHSRLRDY ISIHKNAEYH 310 320 330 340 350 360 RGKGIWSIPC DIALPCATQN ELDAKDASNL IKNGVKMVVE GANMPITIEA IQLLQSEGIL 370 380 390 400 410 420 YAPGKAANAG GVATSALEMS QNSIRTSWTF YEVDTRLRHI MSSIHEHTYD AAEAYGHKGN 430 440 YLVGANIAGF LKVAEAMMEQ GIV

References

[1]

"The genome of Clostridium kluyveri, a strict anaerobe with unique metabolic features." Seedorf H., Fricke W.F., Veith B., Brueggemann H., Liesegang H., Strittmatter A., Miethke M., Buckel W., Hinderberger J., Li F., Hagemeier C., Thauer R.K., Gottschalk G. Proc. Natl. Acad. Sci. U.S.A. 105:2128-2133(2008) [PubMed: 18218779] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000673 Genomic DNA. Translation: EDK35058.1.
RefSeq	YP_001396429.1. NC_009706.1.
3D structure databases
ProteinModelPortal	A5N1R2.
SMR	A5N1R2. Positions 2-442.
ModBase	Search...
Protein-protein interaction databases
STRING	A5N1R2.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5391723.
GenomeReviews	Gene locus CKL_3050 in contig CP000673_GR.
KEGG	ckl:CKL_3050.
NMPDR	fig|431943.4.peg.3080.
PATRIC	19467646. VBICloKlu111549_3153.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0334.
HOGENOM	HBG590661.
OMA	KGLTYGG.
ProtClustDB	PRK09414.
Family and domain databases
InterPro	IPR006095. Glu/Leu/Phe/Val_DH. IPR006096. Glu/Leu/Phe/Val_DH_C. IPR006097. Glu/Leu/Phe/Val_DH_dimer_dom. IPR014362. Glu_DH. IPR016040. NAD(P)-bd_dom. [Graphical view]
Gene3D	G3DSA:3.40.50.720. NAD(P)-bd. 1 hit.
KO	K00262.
Pfam	PF00208. ELFV_dehydrog. 1 hit. PF02812. ELFV_dehydrog_N. 1 hit. [Graphical view]
PIRSF	PIRSF000185. Glu_DH. 1 hit.
PRINTS	PR00082. GLFDHDRGNASE.
SMART	SM00839. ELFV_dehydrog. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A5N1R2_CLOK5

Accession

Primary (citable) accession number: A5N1R2

Entry history

Integrated into UniProtKB/TrEMBL:	July 10, 2007
Last sequence update:	July 10, 2007
Last modified:	January 25, 2012
This is version 33 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)