A5J4I8 (A5J4I8_BURML) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Translation elongation factor, selenocysteine-specific EMBL EDK55815.1

Gene names

Name:	selB EMBL EDK55815.1
ORF Names:	BMAFMH_E0962 EMBL EDK55815.1

Organism

Burkholderia mallei FMH EMBL EDK55815.1

Taxonomic identifier

334802 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Burkholderiaceae › Burkholderia › pseudomallei group › Burkholderia mallei

Protein attributes

Sequence length	651 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Biological process	Protein biosynthesis
Ligand	GTP-binding RuleBase RU000323 Nucleotide-binding
Molecular function	Elongation factor EMBL EDK55815.1
Gene Ontology (GO)
Biological_process	GTP catabolic process Inferred from electronic annotation. Source: GOC selenocysteine incorporation Inferred from electronic annotation. Source: InterPro
Cellular_component	cytoplasm Inferred from electronic annotation. Source: InterPro
Molecular_function	GTP binding Inferred from electronic annotation. Source: UniProtKB-KW GTPase activity Inferred from electronic annotation. Source: InterPro translation elongation factor activity Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A5J4I8 [UniParc]. Last modified June 26, 2007. Version 1. Checksum: CBBE71913C419438	FASTA	651	70,000
	10 20 30 40 50 60 MRAGADGPAR MIVGTAGHID HGKTTLVRAL TGVDTDRLKE EKARGISIEL GYAYTPLPNG 70 80 90 100 110 120 DVLGFIDVPG HEKLVHTMAA GACGIDFALV VIAADDGVMP QTREHLSILQ LLGVAHGALA 130 140 150 160 170 180 LTKCDRVDAA RVARVRDEIR AWLAASPLAD APVFETRASE PDDAGVAALN AHLRDTALAW 190 200 210 220 230 240 RARRDDGLFR LAVDRVFTLA GQGTVVTGTA VAGRVRTGDS LAVARTGETV RVRSIHAQNR 250 260 270 280 290 300 ATDVGHAGER CALNLAGIDK AALARGDAIV DARLATLSPR IDVELTLTAD ADLTISHWTP 310 320 330 340 350 360 LHVHLGTLHR VAHVALLEGE TLGPGRRARA QLNFTEPVFA APGDRFIVRD AQATRTVGGG 370 380 390 400 410 420 RVLDPFGPAR KRRTRARRAW LDALAAWLDE GRLDALLDEA PLGIARATLM HLTGLPAQAW 430 440 450 460 470 480 ALPADAVSVA APGKHADEAR VLARGHWDAL RTRVLDALAA FHQRSPDEQG PDVARLRRIA 490 500 510 520 530 540 APLADDALWR ALTDALIAEG AIVRSGPWLH LPSHAVSFDA AEEALAGRLL PLVAAGRYDP 550 560 570 580 590 600 PWVRDHAAAT LMAEDAVRAL LRKLARRGDV HQVVRDLFYH RDVIAELARL IARLAGEHGG 610 620 630 640 650 GLDAATFRDA TGLGRKRAIQ ILEFFDRVGY TRFHRDLHWL RADSRLLAGS R

References

[1]	DeShazer D., Woods D.E., Nierman W.C. Submitted (MAR-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: FMH EMBL EDK55815.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	DS264095 Genomic DNA. Translation: EDK55815.1.
3D structure databases
ProteinModelPortal	A5J4I8.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	EDK55815; EDK55815; BMAFMH_E0962.
PATRIC	26914272. VBIBurMal45758_2194.
Family and domain databases
Gene3D	1.10.10.10. 3 hits.
InterPro	IPR000795. EF_GTP-bd_dom. IPR015190. Elong_fac_SelB-wing-hlx_typ-2. IPR015191. Elong_fac_SelB-wing-hlx_typ-3. IPR009001. Transl_elong_EF1A/Init_IF2_C. IPR004161. Transl_elong_EFTu/EF1A_2. IPR009000. Transl_elong_init/rib_B-barrel. IPR004535. Transl_elong_SelB. IPR011991. WHTH_DNA-bd_dom. [Graphical view]
Pfam	PF00009. GTP_EFTU. 1 hit. PF03144. GTP_EFTU_D2. 1 hit. PF09106. SelB-wing_2. 1 hit. PF09107. SelB-wing_3. 1 hit. [Graphical view]
PRINTS	PR00315. ELONGATNFCT.
SUPFAM	SSF50465. Elong_init_C. 1 hit. SSF50447. Translat_factor. 1 hit.
TIGRFAMs	TIGR00475. selB. 1 hit.
PROSITE	PS00301. EFACTOR_GTP. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A5J4I8_BURML

Accession

Primary (citable) accession number: A5J4I8

Entry history

Integrated into UniProtKB/TrEMBL:	June 26, 2007
Last sequence update:	June 26, 2007
Last modified:	May 1, 2013
This is version 35 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)