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A5IMY9 (A5IMY9_THEP1) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 27. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Arabinogalactan endo-1,4-beta-galactosidase EMBL ABQ47562.1
EC=3.2.1.89 EMBL ABQ47562.1
Gene names
Ordered Locus Names:Tpet_1555
OrganismThermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) [Complete proteome] [HAMAP]
Taxonomic identifier390874 [NCBI]
Taxonomic lineageBacteria › Thermotogae › Thermotogales › Thermotogaceae › Thermotoga

Protein attributes

Sequence length612 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existencePredicted

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 2323 Potential EMBL ABQ47562.1
Chain24 – 612589 Potential EMBL ABQ47562.1
PRO_5000247071

Sequences

Sequence LengthMass (Da)Tools
A5IMY9 [UniParc].

Last modified June 26, 2007. Version 1.
Checksum: 62DD4D124EC3E665

FASTA61269,257
        10         20         30         40         50         60 
MKEVGLMRGV LFVLMISSMA FGLIVNPVKN LCEDFIFGMD VSMLYEIEQL GGKYFENGVE 

        70         80         90        100        110        120 
KDCLEILKNH GINWIRLRVW NDPRDENGNP LGGGNCDYLK MTEIAKRAKK LGMKVLLDFH 

       130        140        150        160        170        180 
YSDWWADPGK QNKPKEWEYL HGELLERAVY SYTKLVLNHM RRNGALPDMV QVGNEVNNGF 

       190        200        210        220        230        240 
LWPDGKISGE GAGGFDGFTR LLKAAIKAVR EVDPDIKIVI HLAEGGNNSL FRWFFDEITR 

       250        260        270        280        290        300 
RNVDFDVIGV SYYPYWHGTL EDLKNNLYDI ATRYNKDVLV VETAYAWTLE DGDGYPNIFN 

       310        320        330        340        350        360 
GEEMELTGGY KATVQGQATF LRDLMEVVNS VPNGHGLGIF YWEGDWIPVR GAGWKTGEGN 

       370        380        390        400        410        420 
PWDNQAMFDF SGNALPSLNV FKLVKTSSPV EIAIKEILPV EVTTNLGEVP KFPDAVKVLF 

       430        440        450        460        470        480 
SDDSIRSLPV EWNFDSALVE ESGVYKVEGY IKDIDRKIFA TLTVKGSRNY LKNPGFETGE 

       490        500        510        520        530        540 
FSPWQVSGDK KAVKVVKVNP SSNAHQGEYA VNFWLDESFS FELSQEVELP AGVYRVGFWT 

       550        560        570        580        590        600 
HGEKGVKIAL KVSDYGGDER SVEVETTGWL EWKNPEIRNI KVETGRIKIT VSVEGRAGDW 

       610 
GFIDDFYLFR EE

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References

[1]"Complete sequence of Thermotoga petrophila RKU-1."
Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Sims D., Brettin T., Bruce D., Detter J.C., Han C., Tapia R., Schmutz J., Larimer F., Land M., Hauser L. expand/collapse author list , Kyrpides N., Mikhailova N., Nelson K., Gogarten J.P., Noll K., Richardson P.
Submitted (MAY-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: RKU-1 / ATCC BAA-488 / DSM 13995.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000702 Genomic DNA. Translation: ABQ47562.1.
RefSeqYP_001245138.1. NC_009486.1.

3D structure databases

ProteinModelPortalA5IMY9.
ModBaseSearch...

Protein-protein interaction databases

STRINGA5IMY9.

Protein family/group databases

CAZyGH53. Glycoside Hydrolase Family 53.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID5170303.
GenomeReviewsGene locus Tpet_1555 in contig CP000702_GR.
KEGGtpt:Tpet_1555.
PATRIC23945961. VBIThePet65348_1574.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG3867.
HOGENOMHBG465679.
OMAMVAETSW.
ProtClustDBCLSK875631.

Enzyme and pathway databases

BioCycTPET390874:TPET_1555-MONOMER.

Family and domain databases

InterProIPR011081. Big_4.
IPR011683. Glyco_hydro_53.
IPR013781. Glyco_hydro_subgr_catalytic.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
Gene3DG3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
KOK01224.
PfamPF07532. Big_4. 1 hit.
PF07745. Glyco_hydro_53. 1 hit.
[Graphical view]
SUPFAMSSF51445. Glyco_hydro_cat. 1 hit.
ProtoNetSearch...

Entry information

Entry nameA5IMY9_THEP1
AccessionPrimary (citable) accession number: A5IMY9
Entry history
Integrated into UniProtKB/TrEMBL: June 26, 2007
Last sequence update: June 26, 2007
Last modified: December 14, 2011
This is version 27 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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