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A5IMX7 (A5IMX7_THEP1) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 28. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Mannan endo-1,4-beta-mannosidase. Glycosyl Hydrolase family 5 EMBL ABQ47550.1
EC=3.2.1.78 EMBL ABQ47550.1
Gene names
Ordered Locus Names:Tpet_1542
OrganismThermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) [Complete proteome] [HAMAP]
Taxonomic identifier390874 [NCBI]
Taxonomic lineageBacteria › Thermotogae › Thermotogales › Thermotogaceae › Thermotoga

Protein attributes

Sequence length667 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existencePredicted

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 2020 Potential EMBL ABQ47550.1
Chain21 – 667647 Potential EMBL ABQ47550.1
PRO_5000247067

Sequences

Sequence LengthMass (Da)Tools
A5IMX7 [UniParc].

Last modified June 26, 2007. Version 1.
Checksum: 0BB0CA29782E423E

FASTA66776,705
        10         20         30         40         50         60 
MRRFMFILSI VALSFVLFAD EFVRVENGKF VLNGKEFRFI GSNNYYMHYK SNRMIDSVLE 

        70         80         90        100        110        120 
SARDMGIKVL RIWGFLDGES YCRDKNTYMH PEPGVFGVPE GISNAQNGFE RLDYTIAKAK 

       130        140        150        160        170        180 
ELGIKLIIVL VNNWDDFGGM NQYVRWFGGT HHDDFYRDER IKEEYKKYVS FLINHVNVYT 

       190        200        210        220        230        240 
GVPYREEPTI MAWELANELR CETDKSGNTL VEWVKEMSSY IKSLDPNHLV AVGDEGFFSN 

       250        260        270        280        290        300 
YEGFKPYGGE AEWAYNGWSG VDWKKLLSIE TVDFGTFHLY PSHWGVSPEN YAQWGAKWIE 

       310        320        330        340        350        360 
DHIKIAKEIG KPVVLEEYGI PKSAPVNRTA IYRLWNDLVY DLGGDGAMFW MLAGIGEGSD 

       370        380        390        400        410        420 
RDERGYYPDY DGFRIVNDDS PEAELIREYA KLFNTGEDIR EDTCSFILPK DGMEIKKTVE 

       430        440        450        460        470        480 
VRAGVFDYSN TFEKLSVKVE DLVFENEIEH LGYGIYGFDL DTTRIPDGEH EMFLEGHFQG 

       490        500        510        520        530        540 
KTVKDSIKAK VVNEARYVLA GKVDFSSPEE VKNWWNSGTW QAEFESPDIE WNSEVGNGAL 

       550        560        570        580        590        600 
QLNVKLPGKS DWEEVRAARK FEKLSECEIL EYDIYIPDVE GLKGRLRPYA VLNPGWVKIG 

       610        620        630        640        650        660 
LDMNNTSVES AEIVTFGGKE YRKFHVRIEF DKTAGVNELH IGIVGDHLKY NGPIFIDNVK 


LYTKEAE

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References

[1]"Complete sequence of Thermotoga petrophila RKU-1."
Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Sims D., Brettin T., Bruce D., Detter J.C., Han C., Tapia R., Schmutz J., Larimer F., Land M., Hauser L. expand/collapse author list , Kyrpides N., Mikhailova N., Nelson K., Gogarten J.P., Noll K., Richardson P.
Submitted (MAY-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: RKU-1 / ATCC BAA-488 / DSM 13995.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000702 Genomic DNA. Translation: ABQ47550.1.
RefSeqYP_001245126.1. NC_009486.1.

3D structure databases

ProteinModelPortalA5IMX7.
SMRA5IMX7. Positions 493-664.
ModBaseSearch...

Protein-protein interaction databases

STRINGA5IMX7.

Protein family/group databases

CAZyCBM27. Carbohydrate-Binding Module Family 27.
GH5. Glycoside Hydrolase Family 5.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID5170634.
GenomeReviewsGene locus Tpet_1542 in contig CP000702_GR.
KEGGtpt:Tpet_1542.
PATRIC23945937. VBIThePet65348_1562.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG3934.
HOGENOMHBG725977.
OMACEILEYD.
ProtClustDBCLSK875643.

Enzyme and pathway databases

BioCycTPET390874:TPET_1542-MONOMER.

Family and domain databases

InterProIPR015295. Carb-bd_module_27.
IPR008979. Galactose-bd-like.
IPR001547. Glyco_hydro_5.
IPR013781. Glyco_hydro_subgr_catalytic.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
Gene3DG3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
PfamPF09212. CBM27. 1 hit.
PF00150. Cellulase. 1 hit.
[Graphical view]
SUPFAMSSF49785. Gal_bind_like. 1 hit.
SSF51445. Glyco_hydro_cat. 1 hit.
ProtoNetSearch...

Entry information

Entry nameA5IMX7_THEP1
AccessionPrimary (citable) accession number: A5IMX7
Entry history
Integrated into UniProtKB/TrEMBL: June 26, 2007
Last sequence update: June 26, 2007
Last modified: December 14, 2011
This is version 28 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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