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A5IL44 (A5IL44_THEP1) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 25. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Glycoside hydrolase, family 16 EMBL ABQ46917.1
Gene names
Ordered Locus Names:Tpet_0899
OrganismThermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) [Complete proteome] [HAMAP]
Taxonomic identifier390874 [NCBI]
Taxonomic lineageBacteria › Thermotogae › Thermotogales › Thermotogaceae › Thermotoga

Protein attributes

Sequence length641 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existencePredicted

Ontologies

Keywords
   DomainSignal EMBL ABQ46917.1
   Molecular functionHydrolase EMBL ABQ46917.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular functionhydrolase activity, hydrolyzing O-glycosyl compounds

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 1818 Potential EMBL ABQ46917.1
Chain19 – 641623 Potential EMBL ABQ46917.1
PRO_5000246996

Sequences

Sequence LengthMass (Da)Tools
A5IL44 [UniParc].

Last modified June 26, 2007. Version 1.
Checksum: 16CB6ADCA90A3AA2

FASTA64172,610
        10         20         30         40         50         60 
MSRLVFALLL FPVFILAQNI LGNASFDEPI LIAGMDIDPP AEDGSINTEG NWVFFTNSNG 

        70         80         90        100        110        120 
EGTARVENGV LVVEITNGGD HTWSVQIIQA PIRVEKLHKY RVSFRARASS QRNVGVKIGG 

       130        140        150        160        170        180 
TAGRSWAAYN PGTDESGGMV FELGTDWQTY EFEFVMRQET DENARFEFQL GRYTGTVWID 

       190        200        210        220        230        240 
DVVMEDIGVL EVSGEENEIY TEEDEDKVED WQLVWSQEFD DGVIDPNIWN FEIGNGHAKG 

       250        260        270        280        290        300 
IPGWGNGELE YYTDENAFVE NGCLVIEARK EQVSDEYGTY DYTSARMTTE GKFEIKYGKI 

       310        320        330        340        350        360 
EIRAKLPKGK GIWPALWMLG NNIGEVGWPT CGEIDIMEML GHDTRTVYGT AHGPGYSGGA 

       370        380        390        400        410        420 
SIGVAYHLPE GVPDFSEDFH IFSIEWDEDE VEWYVDGQLY HVLSKDELAE LGLEWVFDHP 

       430        440        450        460        470        480 
FFLILNVAVG GYWPGYPDET TQFPQRMYID YIRVYEDKNP ETITGEVDDC EYEQAQQQAG 

       490        500        510        520        530        540 
PEVTYERINN GTFDEPIVND QANNPDEWFI WQAGDYGISG ARVSDYGVRD GYAYITIADP 

       550        560        570        580        590        600 
GTDTWHIQFN QWIGLYRGKT YTISFKAKAD TPRPINVKIL QNHDPWTNYF AQTVNLTADW 

       610        620        630        640 
QTFTFTYTHP DDADEVVQIS FELGKETATT IYFDDVSVSP Q

« Hide

References

[1]"Complete sequence of Thermotoga petrophila RKU-1."
Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Sims D., Brettin T., Bruce D., Detter J.C., Han C., Tapia R., Schmutz J., Larimer F., Land M., Hauser L. expand/collapse author list , Kyrpides N., Mikhailova N., Nelson K., Gogarten J.P., Noll K., Richardson P.
Submitted (MAY-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: RKU-1 / ATCC BAA-488 / DSM 13995.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000702 Genomic DNA. Translation: ABQ46917.1.
RefSeqYP_001244493.1. NC_009486.1.

3D structure databases

ProteinModelPortalA5IL44.
SMRA5IL44. Positions 488-641.
ModBaseSearch...

Protein-protein interaction databases

STRINGA5IL44.

Protein family/group databases

CAZyCBM4. Carbohydrate-Binding Module Family 4.
GH16. Glycoside Hydrolase Family 16.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID5170678.
GenomeReviewsGene locus Tpet_0899 in contig CP000702_GR.
KEGGtpt:Tpet_0899.
PATRIC23944590. VBIThePet65348_0908.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG2273.
HOGENOMHBG465560.
OMAARFEFQL.
ProtClustDBCLSK794849.

Enzyme and pathway databases

BioCycTPET390874:TPET_0899-MONOMER.

Family and domain databases

InterProIPR003305. CenC_carb-bd.
IPR008985. ConA-like_lec_gl.
IPR013320. ConA-like_subgrp.
IPR008979. Galactose-bd-like.
IPR000757. Glyco_hydro_16.
[Graphical view]
Gene3DG3DSA:2.60.120.200. ConA_like_subgrp. 1 hit.
PfamPF02018. CBM_4_9. 2 hits.
PF00722. Glyco_hydro_16. 1 hit.
[Graphical view]
SUPFAMSSF49899. ConA_like_lec_gl. 1 hit.
SSF49785. Gal_bind_like. 2 hits.
ProtoNetSearch...

Entry information

Entry nameA5IL44_THEP1
AccessionPrimary (citable) accession number: A5IL44
Entry history
Integrated into UniProtKB/TrEMBL: June 26, 2007
Last sequence update: June 26, 2007
Last modified: December 14, 2011
This is version 25 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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