A5IKV7 (A5IKV7_THEP1) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Polysaccharide deacetylase EMBL ABQ46830.1

Gene names

Ordered Locus Names:

Tpet_0811

Organism

Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) [Complete proteome] [HAMAP]

Taxonomic identifier

390874 [NCBI]

Taxonomic lineage

Bacteria › Thermotogae › Thermotogales › Thermotogaceae › Thermotoga

Protein attributes

Sequence length	239 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Predicted

Ontologies

Keywords
Domain	Signal EMBL ABQ46830.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 20	20	Potential EMBL ABQ46830.1
	Chain	21 – 239	219	Potential EMBL ABQ46830.1		PRO_5000246975

Sequences

	Sequence		Length	Mass (Da)
	A5IKV7 [UniParc]. Last modified June 26, 2007. Version 1. Checksum: 61CBBC34B165FA4F	FASTA	239	27,216
	10 20 30 40 50 60 MKRLLVFLSI FLTTVLLFSI DSKVNSKEEN GVKLVALTFD DGPDVKLTSA VLDTLEKHGV 70 80 90 100 110 120 VATFFVVGQR LNESTRAILE RMISMGCEIG NHSWNYEPLD KKDPETIKDH IERTNELIKK 130 140 150 160 170 180 YAGKEPRFFR PPNLAVSGTM FDVINMPFVS GVLGYDWAGC DRDPQKIVNN VLKGVRDGAI 190 200 210 220 230 ILLHDVQPEP HPIVEVLEIL IPELKKRGYE FVTLSELFKR KGVNPEDPVY RKKMWVYVE

References

[1]

"Complete sequence of Thermotoga petrophila RKU-1." Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Sims D., Brettin T., Bruce D., Detter J.C., Han C., Tapia R., Schmutz J., Larimer F., Land M., Hauser L. , Kyrpides N., Mikhailova N., Nelson K., Gogarten J.P., Noll K., Richardson P. Submitted (MAY-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: RKU-1 / ATCC BAA-488 / DSM 13995.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000702 Genomic DNA. Translation: ABQ46830.1.
RefSeq	YP_001244406.1. NC_009486.1.
3D structure databases
ProteinModelPortal	A5IKV7.
SMR	A5IKV7. Positions 33-228.
ModBase	Search...
Protein-protein interaction databases
STRING	A5IKV7.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5170495.
GenomeReviews	Gene locus Tpet_0811 in contig CP000702_GR.
KEGG	tpt:Tpet_0811.
PATRIC	23944414. VBIThePet65348_0820.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0726.
HOGENOM	HBG751163.
OMA	MFAPYQW.
ProtClustDB	CLSK794925.
Enzyme and pathway databases
BioCyc	TPET390874:TPET_0811-MONOMER.
Family and domain databases
InterPro	IPR011330. Glyco_hydro/deAcase_b/a-brl. IPR002509. Polysac_deacetylase. [Graphical view]
Gene3D	G3DSA:3.20.20.370. Polysac_deacetylase. 1 hit.
Pfam	PF01522. Polysacc_deac_1. 1 hit. [Graphical view]
SUPFAM	SSF88713. Glyco_hydro/deAcase_b/a-brl. 1 hit.
ProtoNet	Search...

Entry information

Entry name

A5IKV7_THEP1

Accession

Primary (citable) accession number: A5IKV7

Entry history

Integrated into UniProtKB/TrEMBL:	June 26, 2007
Last sequence update:	June 26, 2007
Last modified:	December 14, 2011
This is version 23 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)