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Protein
Submitted name:

Alpha-amylase, putative

Gene

LPC_1102

Organism
Legionella pneumophila (strain Corby)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciLPNE400673:GCIT-1776-MONOMER.

Protein family/group databases

CAZyiGH13. Glycoside Hydrolase Family 13.

Names & Taxonomyi

Protein namesi
Submitted name:
Alpha-amylase, putativeImported
Gene namesi
Ordered Locus Names:LPC_1102Imported
OrganismiLegionella pneumophila (strain Corby)Imported
Taxonomic identifieri400673 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaLegionellalesLegionellaceaeLegionella
ProteomesiUP000001569 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi400673.LPC_1102.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG0366.
HOGENOMiHOG000278264.
KOiK01176.
OMAiRTHENGW.
OrthoDBiEOG6M0T1W.

Family and domain databases

Gene3Di3.20.20.80. 2 hits.
InterProiIPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 3 hits.

Sequencei

Sequence statusi: Complete.

A5ICG9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGYHFLTEGN GIIACYDMYP TQFHSIKDMI NYLPVLKQMG FNALWINPMQ
60 70 80 90 100
MPGDISGFFK TDKNNGVKTG NEVTRSLYAM SHPLLFNPQF SLGSPEDPMG
110 120 130 140 150
TTQRLNSEAL QLFTQNARNL GIVPMFDLVL NHVAIDSPLC QDKPHWFKGV
160 170 180 190 200
HEDFKDVRGF NYDDESIRKE IITEFWQPYI KRYMIEYGFD GVRVDAVGYV
210 220 230 240 250
HPAVRSEIYA YIHSLAAEYG KPKPVILDEA LFSKRPLADE VNYLKLPGIG
260 270 280 290 300
PTHITTEAYN VEFDLASADL PYEITLEEQL KASVVFQQKD GTWRENTKGG
310 320 330 340 350
CINFCGNHDY RSLAMTILFQ MAKKRLESDA FYNDLMSSYQ DLYFKFNAEQ
360 370 380 390 400
EKPHELKEPL KTTLLYSYVD QIKKELEDNK DETTQEFKTL VLEKLALSAL
410 420 430 440 450
TASGGWFLLS GDETCDITAK TVFQRKGAVD KSYYPQREHR IFSEKPVIAH
460 470 480 490 500
KILEKMAEEN FFIENSENKW MQELYRSLSS FPEMQKRLLV SHIDNIKHQI
510 520 530 540 550
NAGIDHVQEK FSRLLASENL NIGFTSQDFL ENPRTHENGW LGLQNNFLFI
560 570 580 590 600
KQLNTLLKRL PASLPGFSSE LVRLPEKPHL IIIVRKNGNE LNAPIDVVVV
610 620 630 640 650
NLEQEKRQTL TKEDFQLIAK NYCNQYFSKN RPSVCDSLRE KLYSHVLKSA
660 670 680 690 700
VNNRVHTDTS IKLNGIHLFE FKETSLNTFF TIEKEKNYSH GNEDNTALTG

NTISH
Length:705
Mass (Da):81,178
Last modified:June 25, 2007 - v1
Checksum:i98482F0F6ADB439F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000675 Genomic DNA. Translation: ABQ55069.1.
RefSeqiYP_001250415.1. NC_009494.2.

Genome annotation databases

EnsemblBacteriaiABQ55069; ABQ55069; LPC_1102.
KEGGilpc:LPC_1102.
PATRICi22308607. VBILegPne45588_1136.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000675 Genomic DNA. Translation: ABQ55069.1.
RefSeqiYP_001250415.1. NC_009494.2.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi400673.LPC_1102.

Protein family/group databases

CAZyiGH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABQ55069; ABQ55069; LPC_1102.
KEGGilpc:LPC_1102.
PATRICi22308607. VBILegPne45588_1136.

Phylogenomic databases

eggNOGiCOG0366.
HOGENOMiHOG000278264.
KOiK01176.
OMAiRTHENGW.
OrthoDBiEOG6M0T1W.

Enzyme and pathway databases

BioCyciLPNE400673:GCIT-1776-MONOMER.

Family and domain databases

Gene3Di3.20.20.80. 2 hits.
InterProiIPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 3 hits.
ProtoNetiSearch...

Publicationsi

  1. "Identification and characterization of a new conjugation/ type IVA secretion system (trb/tra) of L. pneumophila Corby localized on a mobile genomic island."
    Gloeckner G., Albert-Weissenberger C., Weinmann E., Jacobi S., Schunder E., Steinert M., Buchrieser C., Hacker J., Heuner K.
    Submitted (OCT-2006) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: CorbyImported.

Entry informationi

Entry nameiA5ICG9_LEGPC
AccessioniPrimary (citable) accession number: A5ICG9
Entry historyi
Integrated into UniProtKB/TrEMBL: June 25, 2007
Last sequence update: June 25, 2007
Last modified: March 31, 2015
This is version 42 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.