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A5I5S0 (A5I5S0_CLOBH) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 29. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=3.5.1.25 EMBL CAL84398.1
Gene names
Name:nagA EMBL CAL84398.1
Ordered Locus Names:CBO2834, CLC_2711
OrganismClostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A)
Taxonomic identifier441771 [NCBI]
Taxonomic lineageBacteriaFirmicutesClostridiaClostridialesClostridiaceaeClostridium

Protein attributes

Sequence length378 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
A5I5S0 [UniParc].

Last modified June 26, 2007. Version 1.
Checksum: 2FA1A197DB7AE24B

FASTA37841,598
        10         20         30         40         50         60 
MRAIVNGKII IGNEILENKV LLFEKRIVDI LDRKNIYLSK DYQIIDAKGL YVSPGFIDVH 

        70         80         90        100        110        120 
IHGSGGKDVM DGELESIRVI SNTITKRGVT SFLPTTMTMA KEHIYKALDV IKQAMNMDLG 

       130        140        150        160        170        180 
GAKVLGAHLE GPFINPKYKG AQKEDFIKNP SFDFIKGYEN VIKIITLAPE KDENFEFLKD 

       190        200        210        220        230        240 
IKKNTDIVLS IGHSDATYEQ AMAAIDNGIS RATHTFNAMT PLNHRKPGII GAIMNTDISC 

       250        260        270        280        290        300 
ELIADNIHVH KGAVNILTKI KGKDKIILIT DSMRAGCMNN GVWELGGQKV IVKNGSARLE 

       310        320        330        340        350        360 
DNTLAGSILT LDNAVKNMKN NIEASLCEVI SMVTVNPAKD INIYDRKGSI EKGKDADIVI 

       370 
FDKDINISMT IVDGNIVT 

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References

[1]"Genome sequence of a proteolytic (Group I) Clostridium botulinum strain Hall A and comparative analysis of the clostridial genomes."
Sebaihia M., Peck M.W., Minton N.P., Thomson N.R., Holden M.T.G., Mitchell W.J., Carter A.T., Bentley S.D., Mason D.R., Crossman L., Paul C.J., Ivens A., Wells-Bennik M.H.J., Davis I.J., Cerdeno-Tarraga A.M., Churcher C., Quail M.A., Chillingworth T. expand/collapse author list , Feltwell T., Fraser A., Goodhead I., Hance Z., Jagels K., Larke N., Maddison M., Moule S., Mungall K., Norbertczak H., Rabbinowitsch E., Sanders M., Simmonds M., White B., Whithead S., Parkhill J.
Genome Res. 17:1082-1092(2007) [PubMed: 17519437] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Hall / ATCC 3502 / NCTC 13319 / Type A [Sanger].
[2]"Analysis of the neurotoxin complex genes in Clostridium botulinum A1-A4 and B1 strains: BoNT/A3, /Ba4 and /B1 clusters are located within plasmids."
Smith T.J., Hill K.K., Foley B.T., Detter J.C., Munk A.C., Bruce D.C., Doggett N.A., Smith L.A., Marks J.D., Xie G., Brettin T.S.
PLoS ONE 2:E1271-E1271(2007) [PubMed: 18060065] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Hall / ATCC 3502 / NCTC 13319 / Type A [Los Alamos].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000727 Genomic DNA. Translation: ABS36049.1.
AM412317 Genomic DNA. Translation: CAL84398.1.
RefSeqYP_001255334.1. NC_009495.1.
YP_001388547.1. NC_009698.1.

3D structure databases

ProteinModelPortalA5I5S0.
ModBaseSearch...

Protein-protein interaction databases

STRINGA5I5S0.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID5187595.
5400307.
GenomeReviewsGene locus CBO2834 in contig AM412317_GR.
Gene locus CLC_2711 in contig CP000727_GR.
KEGGcbh:CLC_2711.
cbo:CBO2834.
PATRIC19367755. VBICloBot22612_2820.

Phylogenomic databases

eggNOGCOG1820.
HOGENOMHBG464950.
OMALGAHMEG.
ProtClustDBCLSK882323.

Family and domain databases

InterProIPR006680. Amidohydro_1.
IPR003764. GlcNAc_6-P_deAcase.
IPR011059. Metal-dep_hydrolase_composite.
[Graphical view]
KOK01443.
PfamPF01979. Amidohydro_1. 1 hit.
[Graphical view]
SUPFAMSSF51338. Metalo_hydrolase. 1 hit.
TIGRFAMsTIGR00221. NagA. 1 hit.
ProtoNetSearch...

Entry information

Entry nameA5I5S0_CLOBH
AccessionPrimary (citable) accession number: A5I5S0
Secondary accession number(s): A7G6Y2
Entry history
Integrated into UniProtKB/TrEMBL: June 26, 2007
Last sequence update: June 26, 2007
Last modified: December 14, 2011
This is version 29 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)