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Protein
Submitted name:

Glycerol uptake facilitator protein

Gene

glpF

Organism
Clostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

TransportUniRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Glycerol uptake facilitator proteinImported
Gene namesi
Name:glpFImported
Ordered Locus Names:CBO2785Imported
OrganismiClostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A)Imported
Taxonomic identifieri441771 [NCBI]
Taxonomic lineageiBacteriaFirmicutesClostridiaClostridialesClostridiaceaeClostridium
Proteomesi
  • UP000001986 Componenti: Chromosome

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei6 – 27HelicalSequence analysisAdd BLAST22
Transmembranei39 – 62HelicalSequence analysisAdd BLAST24
Transmembranei82 – 104HelicalSequence analysisAdd BLAST23
Transmembranei134 – 154HelicalSequence analysisAdd BLAST21
Transmembranei160 – 184HelicalSequence analysisAdd BLAST25
Transmembranei211 – 233HelicalSequence analysisAdd BLAST23

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

Structurei

3D structure databases

ProteinModelPortaliA5I5M1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the MIP/aquaporin (TC 1.A.8) family. [View classification]UniRule annotation

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

HOGENOMiHOG000288285.
KOiK02440.
OMAiYMIGYGH.

Family and domain databases

Gene3Di1.20.1080.10. 1 hit.
InterProiIPR023271. Aquaporin-like.
IPR000425. MIP.
IPR022357. MIP_CS.
[Graphical view]
PANTHERiPTHR19139. PTHR19139. 1 hit.
PfamiPF00230. MIP. 1 hit.
[Graphical view]
PRINTSiPR00783. MINTRINSICP.
SUPFAMiSSF81338. SSF81338. 1 hit.
TIGRFAMsiTIGR00861. MIP. 1 hit.
PROSITEiPS00221. MIP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A5I5M1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSIYMAEFLG TMMLIWLGDG VVASVALNKS KGKDGGWIVV TAAWGLAVAI
60 70 80 90 100
PAYIFGGISG AHMNPAVTIG NAIAGNFPWA NVAGYITAQM LGGFAGAVLV
110 120 130 140 150
WLTYLPHWKA TEDKATKLGV FCTAPAIRDT KANFVTEFIV TALLVFGLMG
160 170 180 190 200
LGQVKMVDGF GPLTAGALIF VLGLSLGGPT GYAINPARDL APRIAHAILP
210 220 230
IAGKGDSDWK YAWIPVLGPI LGGILGALLF MLVF
Length:234
Mass (Da):24,381
Last modified:June 26, 2007 - v1
Checksum:i728A5FCEDD91E5DF
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM412317 Genomic DNA. Translation: CAL84348.1.
RefSeqiWP_011987068.1. NC_009698.1.
YP_001255286.1. NC_009495.1.
YP_001388499.1. NC_009698.1.

Genome annotation databases

GeneIDi5187210.
5401062.
KEGGicbh:CLC_2661.
cbo:CBO2785.
PATRICi19367653. VBICloBot22612_2769.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM412317 Genomic DNA. Translation: CAL84348.1.
RefSeqiWP_011987068.1. NC_009698.1.
YP_001255286.1. NC_009495.1.
YP_001388499.1. NC_009698.1.

3D structure databases

ProteinModelPortaliA5I5M1.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi5187210.
5401062.
KEGGicbh:CLC_2661.
cbo:CBO2785.
PATRICi19367653. VBICloBot22612_2769.

Phylogenomic databases

HOGENOMiHOG000288285.
KOiK02440.
OMAiYMIGYGH.

Family and domain databases

Gene3Di1.20.1080.10. 1 hit.
InterProiIPR023271. Aquaporin-like.
IPR000425. MIP.
IPR022357. MIP_CS.
[Graphical view]
PANTHERiPTHR19139. PTHR19139. 1 hit.
PfamiPF00230. MIP. 1 hit.
[Graphical view]
PRINTSiPR00783. MINTRINSICP.
SUPFAMiSSF81338. SSF81338. 1 hit.
TIGRFAMsiTIGR00861. MIP. 1 hit.
PROSITEiPS00221. MIP. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiA5I5M1_CLOBH
AccessioniPrimary (citable) accession number: A5I5M1
Secondary accession number(s): A7G6T4
Entry historyi
Integrated into UniProtKB/TrEMBL: June 26, 2007
Last sequence update: June 26, 2007
Last modified: November 2, 2016
This is version 77 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.