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A5I446

- A5I446_CLOBH

UniProt

A5I446 - A5I446_CLOBH

Protein

Superoxide dismutase

Gene

sodA

Organism
Clostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 58 (01 Oct 2014)
      Sequence version 1 (26 Jun 2007)
      Previous versions | rss
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    Functioni

    Destroys radicals which are normally produced within the cells and which are toxic to biological systems.UniRule annotation
    Destroys radicals which are normally produced within the cells and which are toxic to biological systems By similarity.

    Catalytic activityi

    2 superoxide + 2 H+ = O2 + H2O2.UniRule annotation

    GO - Molecular functioni

    1. metal ion binding Source: InterPro
    2. superoxide dismutase activity Source: UniProtKB-EC

    Keywords - Molecular functioni

    OxidoreductaseUniRule annotationImported

    Enzyme and pathway databases

    BioCyciCBOT413999:GJ72-2341-MONOMER.
    CBOT441771:GIWX-2170-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Superoxide dismutaseUniRule annotation (EC:1.15.1.1UniRule annotation)
    Gene namesi
    Name:sodAImported
    Ordered Locus Names:CBO2277Imported, CLC_2204Imported
    OrganismiClostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A)Imported
    Taxonomic identifieri441771 [NCBI]
    Taxonomic lineageiBacteriaFirmicutesClostridiaClostridialesClostridiaceaeClostridium
    ProteomesiUP000002409: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi413999.CBO2277.

    Structurei

    3D structure databases

    ProteinModelPortaliA5I446.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the iron/manganese superoxide dismutase family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0605.
    HOGENOMiHOG000013583.
    KOiK04564.
    OMAiTERYTAC.
    OrthoDBiEOG63NMNT.

    Family and domain databases

    InterProiIPR001189. Mn/Fe_SOD.
    IPR019833. Mn/Fe_SOD_BS.
    IPR019832. Mn/Fe_SOD_C.
    IPR019831. Mn/Fe_SOD_N.
    [Graphical view]
    PANTHERiPTHR11404. PTHR11404. 1 hit.
    PfamiPF02777. Sod_Fe_C. 1 hit.
    PF00081. Sod_Fe_N. 1 hit.
    [Graphical view]
    PIRSFiPIRSF000349. SODismutase. 1 hit.
    PRINTSiPR01703. MNSODISMTASE.
    SUPFAMiSSF46609. SSF46609. 1 hit.
    SSF54719. SSF54719. 1 hit.
    PROSITEiPS00088. SOD_MN. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    A5I446-1 [UniParc]FASTAAdd to Basket

    « Hide

    MAHTLPNLNY DYNALEPHYD EQTLKIHHDI HHKAYVDGLN KAEQKLQEAR    50
    ESGDFALIKH WEKEIAFHGS GHILHTLFWE NMAPNGNLNP EGSAIERIKQ 100
    DFGDYEKFKK QFTEAAIAVE GSGWTILAWN PMFQKLVILQ VEKHQNLTQW 150
    GVVPLLILDL WEHAYYLKYQ NRRAEFINAW WNIVNWDIVN TRYDNAIK 198
    Length:198
    Mass (Da):23,336
    Last modified:June 26, 2007 - v1
    Checksum:iB1BFA3D73689B8F3
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000727 Genomic DNA. Translation: ABS39066.1.
    AM412317 Genomic DNA. Translation: CAL83817.1.
    RefSeqiWP_011986744.1. NC_009698.1.
    YP_001254769.1. NC_009495.1.
    YP_001388048.1. NC_009698.1.

    Genome annotation databases

    EnsemblBacteriaiABS39066; ABS39066; CLC_2204.
    GeneIDi5187439.
    5400103.
    KEGGicbh:CLC_2204.
    cbo:CBO2277.
    PATRICi19366615. VBICloBot22612_2250.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000727 Genomic DNA. Translation: ABS39066.1 .
    AM412317 Genomic DNA. Translation: CAL83817.1 .
    RefSeqi WP_011986744.1. NC_009698.1.
    YP_001254769.1. NC_009495.1.
    YP_001388048.1. NC_009698.1.

    3D structure databases

    ProteinModelPortali A5I446.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 413999.CBO2277.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABS39066 ; ABS39066 ; CLC_2204 .
    GeneIDi 5187439.
    5400103.
    KEGGi cbh:CLC_2204.
    cbo:CBO2277.
    PATRICi 19366615. VBICloBot22612_2250.

    Phylogenomic databases

    eggNOGi COG0605.
    HOGENOMi HOG000013583.
    KOi K04564.
    OMAi TERYTAC.
    OrthoDBi EOG63NMNT.

    Enzyme and pathway databases

    BioCyci CBOT413999:GJ72-2341-MONOMER.
    CBOT441771:GIWX-2170-MONOMER.

    Family and domain databases

    InterProi IPR001189. Mn/Fe_SOD.
    IPR019833. Mn/Fe_SOD_BS.
    IPR019832. Mn/Fe_SOD_C.
    IPR019831. Mn/Fe_SOD_N.
    [Graphical view ]
    PANTHERi PTHR11404. PTHR11404. 1 hit.
    Pfami PF02777. Sod_Fe_C. 1 hit.
    PF00081. Sod_Fe_N. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF000349. SODismutase. 1 hit.
    PRINTSi PR01703. MNSODISMTASE.
    SUPFAMi SSF46609. SSF46609. 1 hit.
    SSF54719. SSF54719. 1 hit.
    PROSITEi PS00088. SOD_MN. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 3502Imported.
    2. "Analysis of the neurotoxin complex genes in Clostridium botulinum A1-A4 and B1 strains: BoNT/A3, /Ba4 and /B1 clusters are located within plasmids."
      Smith T.J., Hill K.K., Foley B.T., Detter J.C., Munk A.C., Bruce D.C., Doggett N.A., Smith L.A., Marks J.D., Xie G., Brettin T.S.
      PLoS ONE 2:E1271-E1271(2007) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: HallImported and Hall / ATCC 3502 / NCTC 13319 / Type A [Los Alamos]Imported.
    3. Shrivastava S., Brinkac L.M., Dodson R.J., Harkins D.M., Durkin A.S., Sutton G.
      Submitted (AUG-2009) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: HallImported.

    Entry informationi

    Entry nameiA5I446_CLOBH
    AccessioniPrimary (citable) accession number: A5I446
    Secondary accession number(s): A7G5I3
    Entry historyi
    Integrated into UniProtKB/TrEMBL: June 26, 2007
    Last sequence update: June 26, 2007
    Last modified: October 1, 2014
    This is version 58 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3