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A5I446

- A5I446_CLOBH

UniProt

A5I446 - A5I446_CLOBH

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Protein

Superoxide dismutase

Gene
sodA, CBO2277, CLC_2204
Organism
Clostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A)
Status
Unreviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Destroys radicals which are normally produced within the cells and which are toxic to biological systems By similarity.

Catalytic activityi

2 superoxide + 2 H+ = O2 + H2O2.

GO - Molecular functioni

  1. metal ion binding Source: InterPro
  2. superoxide dismutase activity Source: UniProtKB-EC
Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseUniRule annotationImported

Enzyme and pathway databases

BioCyciCBOT413999:GJ72-2341-MONOMER.
CBOT441771:GIWX-2170-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Superoxide dismutaseUniRule annotation (EC:1.15.1.1UniRule annotation)
Gene namesi
Name:sodAImported
Ordered Locus Names:CBO2277Imported, CLC_2204Imported
OrganismiClostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A)
Taxonomic identifieri441771 [NCBI]
Taxonomic lineageiBacteriaFirmicutesClostridiaClostridialesClostridiaceaeClostridium
ProteomesiUP000001986: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi413999.CBO2277.

Structurei

3D structure databases

ProteinModelPortaliA5I446.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG0605.
HOGENOMiHOG000013583.
KOiK04564.
OMAiTERYTAC.
OrthoDBiEOG63NMNT.

Family and domain databases

InterProiIPR001189. Mn/Fe_SOD.
IPR019833. Mn/Fe_SOD_BS.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
[Graphical view]
PANTHERiPTHR11404. PTHR11404. 1 hit.
PfamiPF02777. Sod_Fe_C. 1 hit.
PF00081. Sod_Fe_N. 1 hit.
[Graphical view]
PIRSFiPIRSF000349. SODismutase. 1 hit.
PRINTSiPR01703. MNSODISMTASE.
SUPFAMiSSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 1 hit.
PROSITEiPS00088. SOD_MN. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A5I446-1 [UniParc]FASTAAdd to Basket

« Hide

MAHTLPNLNY DYNALEPHYD EQTLKIHHDI HHKAYVDGLN KAEQKLQEAR    50
ESGDFALIKH WEKEIAFHGS GHILHTLFWE NMAPNGNLNP EGSAIERIKQ 100
DFGDYEKFKK QFTEAAIAVE GSGWTILAWN PMFQKLVILQ VEKHQNLTQW 150
GVVPLLILDL WEHAYYLKYQ NRRAEFINAW WNIVNWDIVN TRYDNAIK 198
Length:198
Mass (Da):23,336
Last modified:June 26, 2007 - v1
Checksum:iB1BFA3D73689B8F3
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000727 Genomic DNA. Translation: ABS39066.1.
AM412317 Genomic DNA. Translation: CAL83817.1.
RefSeqiWP_011986744.1. NC_009698.1.
YP_001254769.1. NC_009495.1.
YP_001388048.1. NC_009698.1.

Genome annotation databases

EnsemblBacteriaiABS39066; ABS39066; CLC_2204.
GeneIDi5187439.
5400103.
KEGGicbh:CLC_2204.
cbo:CBO2277.
PATRICi19366615. VBICloBot22612_2250.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000727 Genomic DNA. Translation: ABS39066.1 .
AM412317 Genomic DNA. Translation: CAL83817.1 .
RefSeqi WP_011986744.1. NC_009698.1.
YP_001254769.1. NC_009495.1.
YP_001388048.1. NC_009698.1.

3D structure databases

ProteinModelPortali A5I446.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 413999.CBO2277.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABS39066 ; ABS39066 ; CLC_2204 .
GeneIDi 5187439.
5400103.
KEGGi cbh:CLC_2204.
cbo:CBO2277.
PATRICi 19366615. VBICloBot22612_2250.

Phylogenomic databases

eggNOGi COG0605.
HOGENOMi HOG000013583.
KOi K04564.
OMAi TERYTAC.
OrthoDBi EOG63NMNT.

Enzyme and pathway databases

BioCyci CBOT413999:GJ72-2341-MONOMER.
CBOT441771:GIWX-2170-MONOMER.

Family and domain databases

InterProi IPR001189. Mn/Fe_SOD.
IPR019833. Mn/Fe_SOD_BS.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
[Graphical view ]
PANTHERi PTHR11404. PTHR11404. 1 hit.
Pfami PF02777. Sod_Fe_C. 1 hit.
PF00081. Sod_Fe_N. 1 hit.
[Graphical view ]
PIRSFi PIRSF000349. SODismutase. 1 hit.
PRINTSi PR01703. MNSODISMTASE.
SUPFAMi SSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 1 hit.
PROSITEi PS00088. SOD_MN. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 3502Imported and Hall / ATCC 3502 / NCTC 13319 / Type A [Sanger].
  2. "Analysis of the neurotoxin complex genes in Clostridium botulinum A1-A4 and B1 strains: BoNT/A3, /Ba4 and /B1 clusters are located within plasmids."
    Smith T.J., Hill K.K., Foley B.T., Detter J.C., Munk A.C., Bruce D.C., Doggett N.A., Smith L.A., Marks J.D., Xie G., Brettin T.S.
    PLoS ONE 2:E1271-E1271(2007) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: HallImported and Hall / ATCC 3502 / NCTC 13319 / Type A [Los Alamos].
  3. Shrivastava S., Brinkac L.M., Dodson R.J., Harkins D.M., Durkin A.S., Sutton G.
    Submitted (AUG-2009) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: HallImported.

Entry informationi

Entry nameiA5I446_CLOBH
AccessioniPrimary (citable) accession number: A5I446
Secondary accession number(s): A7G5I3
Entry historyi
Integrated into UniProtKB/TrEMBL: June 26, 2007
Last sequence update: June 26, 2007
Last modified: September 3, 2014
This is version 57 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

External Data

Dasty 3

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