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A5HYZ2 (A5HYZ2_CLOBH) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 32. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
EAL domain protein EMBL ABS38388.1
Submitted name:
Putative signaling protein EMBL CAL82001.1
Gene names
Ordered Locus Names:CBO0448, CLC_0522
OrganismClostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A)
Taxonomic identifier441771 [NCBI]
Taxonomic lineageBacteria › Firmicutes › Clostridia › Clostridiales › Clostridiaceae › Clostridium

Protein attributes

Sequence length403 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
None. [Check GOA]

Sequences

Sequence LengthMass (Da)Tools
A5HYZ2 [UniParc].

Last modified June 26, 2007. Version 1.
Checksum: 81A37F91704CDC2C

FASTA40346,722
        10         20         30         40         50         60 
MDTFVARQPI FDINENVVAY ELLFRTNNEN NEFINIDGDI ATSKVIINSF LLIGIKNLTN 

        70         80         90        100        110        120 
GKKAFINFTE NLILDDIASL LPKEYVTIEI LENVTPSKAI ICSCKNLKQE GYTIALDDFV 

       130        140        150        160        170        180 
LMDNLKELIE LADIIKIDFT ITKGDERKEI IDKILKINNK IKFLAEKIET REEFTEAASM 

       190        200        210        220        230        240 
GYSLFQGYFF SKPTIFNERD LPIHSTTKYK ILKEINKEDI DLNYLEELIK TDLSLYYKLL 

       250        260        270        280        290        300 
KFINSSFSLK KNITSVKKAI TLIGEKQTIR FISFILVYDI TSNNKEYVKT TLVRAKFLDL 

       310        320        330        340        350        360 
LSEKTNYINK SDELFFMGLF YGIEDFLNKP LKDILHDLPI SQDTKSALLG KKNKLNYILN 

       370        380        390        400 
LVLNYEKGEW KKVNAICKHL NIYPNELTTI YINALDWTNK FNL

« Hide

References

[1]"Genome sequence of a proteolytic (Group I) Clostridium botulinum strain Hall A and comparative analysis of the clostridial genomes."
Sebaihia M., Peck M.W., Minton N.P., Thomson N.R., Holden M.T.G., Mitchell W.J., Carter A.T., Bentley S.D., Mason D.R., Crossman L., Paul C.J., Ivens A., Wells-Bennik M.H.J., Davis I.J., Cerdeno-Tarraga A.M., Churcher C., Quail M.A., Chillingworth T. expand/collapse author list , Feltwell T., Fraser A., Goodhead I., Hance Z., Jagels K., Larke N., Maddison M., Moule S., Mungall K., Norbertczak H., Rabbinowitsch E., Sanders M., Simmonds M., White B., Whithead S., Parkhill J.
Genome Res. 17:1082-1092(2007) [PubMed: 17519437] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Hall / ATCC 3502 / NCTC 13319 / Type A [Sanger].
[2]"Analysis of the neurotoxin complex genes in Clostridium botulinum A1-A4 and B1 strains: BoNT/A3, /Ba4 and /B1 clusters are located within plasmids."
Smith T.J., Hill K.K., Foley B.T., Detter J.C., Munk A.C., Bruce D.C., Doggett N.A., Smith L.A., Marks J.D., Xie G., Brettin T.S.
PLoS ONE 2:E1271-E1271(2007) [PubMed: 18060065] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Hall / ATCC 3502 / NCTC 13319 / Type A [Los Alamos].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000727 Genomic DNA. Translation: ABS38388.1.
AM412317 Genomic DNA. Translation: CAL82001.1.
RefSeqYP_001252992.1. NC_009495.1.
YP_001386407.1. NC_009698.1.

3D structure databases

ProteinModelPortalA5HYZ2.
ModBaseSearch...

Protein-protein interaction databases

STRINGA5HYZ2.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID5184703.
5398745.
GenomeReviewsGene locus CBO0448 in contig AM412317_GR.
Gene locus CLC_0522 in contig CP000727_GR.
KEGGcbh:CLC_0522.
cbo:CBO0448.
PATRIC19363013. VBICloBot22612_0451.

Phylogenomic databases

eggNOGCOG3434.
HOGENOMHBG537479.
OMARQPIFNR.
ProtClustDBCLSK971611.

Family and domain databases

InterProIPR014408. dGMP_Pdiesterase_EAL/HD-GYP.
IPR001633. Diguanylate_PEstase_EAL_dom.
IPR013976. HDOD.
[Graphical view]
Gene3DG3DSA:3.20.20.450. G3DSA:3.20.20.450. 1 hit.
G3DSA:1.10.3150.10. HDOD. 1 hit.
KOK07181.
PfamPF00563. EAL. 1 hit.
PF08668. HDOD. 1 hit.
[Graphical view]
PIRSFPIRSF003180. DiGMPpdiest_YuxH. 1 hit.
SMARTSM00052. EAL. 1 hit.
[Graphical view]
SUPFAMSSF141868. SSF141868. 1 hit.
PROSITEPS50883. EAL. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA5HYZ2_CLOBH
AccessionPrimary (citable) accession number: A5HYZ2
Secondary accession number(s): A7G0Y8
Entry history
Integrated into UniProtKB/TrEMBL: June 26, 2007
Last sequence update: June 26, 2007
Last modified: December 14, 2011
This is version 32 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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