A5GVF8 (RPIA_SYNR3) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
Ribose-5-phosphate isomerase A
EC=5.3.1.6

Alternative name(s):
Phosphoriboisomerase A
Short name=PRI

Gene names

Name:	rpiA
Ordered Locus Names:	SynRCC307_1964

Organism

Synechococcus sp. (strain RCC307) [Complete proteome] [HAMAP]

Taxonomic identifier

316278 [NCBI]

Taxonomic lineage

Bacteria › Cyanobacteria › Chroococcales › Synechococcus

Protein attributes

Sequence length	237 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	D-ribose 5-phosphate = D-ribulose 5-phosphate. HAMAP MF_00170
Pathway	Carbohydrate degradation; pentose phosphate pathway; D-ribose 5-phosphate from D-ribulose 5-phosphate (non-oxidative stage): step 1/1. HAMAP MF_00170
Sequence similarities	Belongs to the ribose 5-phosphate isomerase family.

Ontologies

Keywords
Molecular function	Isomerase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	pentose-phosphate shunt, non-oxidative branch Inferred from electronic annotation. Source: InterPro
Molecular function	ribose-5-phosphate isomerase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 237	237	Ribose-5-phosphate isomerase A HAMAP MF_00170		PRO_1000017019

Sequences

	Sequence		Length	Mass (Da)
	A5GVF8 [UniParc]. Last modified June 12, 2007. Version 1. Checksum: 0555739CE84575A0	FASTA	237	24,787
	10 20 30 40 50 60 MADLQTQMKQ AVALAATDQV KNGMVLGLGS GSTAALMIQE VGARLRDGRL TDIVGVTTSF 70 80 90 100 110 120 QGEVLAAELG IPLQSLNAID RIDLAIDGAD EVDPAFELIK GGGACHVQEK LVARRAERFV 130 140 150 160 170 180 VVVDSTKLVE RLNLGFLLPV EVLAGAWRQV QAELQQLGGS AELRMAQRKA GPVVTDQGNL 190 200 210 220 230 VLDVSFAGGI NDPAGLETTI NNIPGVLENG LFVGLADQVL VGEINDGVAG VRDLVKS

References

[1]	Genoscope Submitted (MAY-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: RCC307.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CT978603 Genomic DNA. Translation: CAK28867.1.
RefSeq	YP_001228220.1. NC_009482.1.
3D structure databases
ProteinModelPortal	A5GVF8.
ModBase	Search...
Protein-protein interaction databases
STRING	A5GVF8.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5157725.
GenomeReviews	Gene locus SynRCC307_1964 in contig CT978603_GR.
KEGG	syr:SynRCC307_1964.
PATRIC	23824851. VBISynSp108374_1971.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0120.
HOGENOM	HBG515603.
OMA	NLSLYVD.
PhylomeDB	A5GVF8.
ProtClustDB	PRK00702.
Family and domain databases
HAMAP	MF_00170. Rib_5P_isom_A. [Tree]
InterPro	IPR004788. Ribose5P_isomerase_typA. IPR020672. Ribose5P_isomerase_typA_subgr. [Graphical view]
KO	K01807.
PANTHER	PTHR11934. RpiA. 1 hit.
Pfam	PF06026. Rib_5-P_isom_A. 1 hit. [Graphical view]
TIGRFAMs	TIGR00021. RpiA. 1 hit.
ProtoNet	Search...

Entry information

Entry name

RPIA_SYNR3

Accession

Primary (citable) accession number: A5GVF8

Entry history

Integrated into UniProtKB/Swiss-Prot:	January 15, 2008
Last sequence update:	June 12, 2007
Last modified:	December 14, 2011
This is version 26 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program