A5GV12 (A5GV12_SYNR3) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase EMBL CAK28721.1
EC=3.5.1.- EMBL CAK28721.1

Gene names

Name:	lpxC EMBL CAK28721.1
Ordered Locus Names:	SynRCC307_1818

Organism

Synechococcus sp. (strain RCC307) [Complete proteome] [HAMAP]

Taxonomic identifier

316278 [NCBI]

Taxonomic lineage

Bacteria › Cyanobacteria › Chroococcales › Synechococcus

Protein attributes

Sequence length	295 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell By similarity. SAAS SAAS015870
Catalytic activity	UDP-3-O-(3-hydroxytetradecanoyl)-N-acetylglucosamine + H2O = UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine + acetate. SAAS SAAS015870
Pathway	Glycolipid biosynthesis; lipid IV(A) biosynthesis; lipid IV(A) from (3R)-3-hydroxytetradecanoyl-[acyl-carrier-protein] and UDP-N-acetyl-alpha-D-glucosamine: step 2/6. SAAS SAAS015870

Ontologies

Keywords
Biological process	Lipid A biosynthesis SAAS SAAS015870 Lipid synthesis
Molecular function	Hydrolase SAAS SAAS015870 EMBL CAK28721.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	lipid A biosynthetic process Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A5GV12 [UniParc]. Last modified June 12, 2007. Version 1. Checksum: 8B0AAEC3B8D3AFF7	FASTA	295	31,335
	10 20 30 40 50 60 MIWASDYSRA YTLAAAVERR GVGLHSGKDC LVRLKPGSKP GFWVGFLGQP DQEPVMLAPH 70 80 90 100 110 120 QVRDTRLCTA LEIGGRPLAT VEHLLAALAG VGLTQAEIWL EGHEIPLLDG SALPWVEVIA 130 140 150 160 170 180 EAGLEDLGPR APLPALAAPI SCQRGNSFVQ ALPSEQLLLS AAIEFPQPAI GRQLFSLVLS 190 200 210 220 230 240 PESFVREIAP ARTFGFKDQV EQLREAGLIQ GGALDNALVC DGDQWVNPPL RFADEPVRHK 250 260 270 280 290 LLDLIGDLAL AGLPLAQVMA FRASHNLHTQ LAAALAASSA PLSAVTSRGD LPSVA

References

[1]	Genoscope Submitted (MAY-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CT978603 Genomic DNA. Translation: CAK28721.1.
RefSeq	YP_001228074.1. NC_009482.1.
3D structure databases
ProteinModelPortal	A5GV12.
ModBase	Search...
Protein-protein interaction databases
STRING	A5GV12.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5157550.
GenomeReviews	Gene locus SynRCC307_1818 in contig CT978603_GR.
KEGG	syr:SynRCC307_1818.
PATRIC	23824575. VBISynSp108374_1834.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0774.
HOGENOM	HBG482342.
OMA	KAYKSGH.
PhylomeDB	A5GV12.
ProtClustDB	PRK13186.
Family and domain databases
InterPro	IPR020568. Ribosomal_S5_D2-typ_fold. IPR004463. UDP-acyl_GlcNac_deAcase. IPR011334. UDP-acyl_GlcNac_deAcase_C. IPR015870. UDP-acyl_N-AcGlcN_deAcase_N. [Graphical view]
Gene3D	G3DSA:3.30.1700.10. UDP-acyl_N-AcGlcN_deAcase_C. 1 hit. G3DSA:3.30.230.20. UDP-acyl_N-AcGlcN_deAcase_N. 1 hit.
KO	K02535.
Pfam	PF03331. LpxC. 1 hit. [Graphical view]
SUPFAM	SSF54211. Ribosomal_S5_D2-typ_fold. 2 hits.
TIGRFAMs	TIGR00325. LpxC. 1 hit.
ProtoNet	Search...

Entry information

Entry name

A5GV12_SYNR3

Accession

Primary (citable) accession number: A5GV12

Entry history

Integrated into UniProtKB/TrEMBL:	June 12, 2007
Last sequence update:	June 12, 2007
Last modified:	December 14, 2011
This is version 31 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)