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A5GU88

- A5GU88_SYNR3

UniProt

A5GU88 - A5GU88_SYNR3

Protein

Glutamate decarboxylase

Gene

gadA

Organism
Synechococcus sp. (strain RCC307)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 44 (01 Oct 2014)
      Sequence version 1 (12 Jun 2007)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    L-glutamate = 4-aminobutanoate + CO2.UniRule annotation

    Cofactori

    Pyridoxal phosphate.UniRule annotation

    GO - Molecular functioni

    1. glutamate decarboxylase activity Source: UniProtKB-EC
    2. pyridoxal phosphate binding Source: InterPro

    GO - Biological processi

    1. glutamate metabolic process Source: InterPro

    Keywords - Molecular functioni

    DecarboxylaseUniRule annotation, Lyase

    Keywords - Ligandi

    Pyridoxal phosphateUniRule annotation

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Glutamate decarboxylaseUniRule annotation (EC:4.1.1.15UniRule annotation)
    Gene namesi
    Name:gadAImported
    Ordered Locus Names:SynRCC307_1544Imported
    OrganismiSynechococcus sp. (strain RCC307)Imported
    Taxonomic identifieri316278 [NCBI]
    Taxonomic lineageiBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechococcus
    ProteomesiUP000001115: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi316278.SynRCC307_1544.

    Structurei

    3D structure databases

    ProteinModelPortaliA5GU88.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the group II decarboxylase family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0076.
    HOGENOMiHOG000070228.
    KOiK01580.
    OMAiMIGRLFN.
    OrthoDBiEOG6TFCPW.

    Family and domain databases

    Gene3Di3.40.640.10. 1 hit.
    3.90.1150.10. 1 hit.
    InterProiIPR010107. Glutamate_decarboxylase.
    IPR002129. PyrdxlP-dep_de-COase.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    IPR015422. PyrdxlP-dep_Trfase_major_sub2.
    [Graphical view]
    PANTHERiPTHR11999:SF1. PTHR11999:SF1. 1 hit.
    PfamiPF00282. Pyridoxal_deC. 1 hit.
    [Graphical view]
    SUPFAMiSSF53383. SSF53383. 1 hit.
    TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    A5GU88-1 [UniParc]FASTAAdd to Basket

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    METSRPGLDL ETNLGHRLQQ RNHTDAVLPR DQLAKHGLHA DLAYQLIHDH    50
    LMLDGNAMLN LATFVGTWME PEALHLMREC ADKNMIDKDE YPQTAELENR 100
    CLRMLARLWN APDPEAAVGT STTGSSEACM LGGMVLRWHW RQRRAAQGLD 150
    DRRPNLVMGT NTQICWDKFC AYFDVEARMV PISRDHLQMT AEGAVAACDE 200
    NTIGVVGVLG STFDGSYEPI EAIQQGLDQL QERTGLDIPI HVDGASGAFV 250
    APFNSPELPW DFRLPRVKSI NTSGHKYGGV LPGVGWVLWR EQADLPEELR 300
    FNVNYLGGQM PTIGMNFSRP GAQVVAQYFN FIHLGHAGYC QRMACLEATA 350
    SYLADSIAAM APMKLLSHPR GQLPVFAVTL EDSVDTWTVF QLSERLRARG 400
    WQVPAYTMPA ACEDLAVLRF VIRAGFTRDM ADLLLRDLQN AVDWFQQLSS 450
    PMPDPNPEHR PFHH 464
    Length:464
    Mass (Da):51,943
    Last modified:June 12, 2007 - v1
    Checksum:i6EDED4C0D2D802FE
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CT978603 Genomic DNA. Translation: CAK28447.1.
    RefSeqiWP_011935961.1. NC_009482.1.
    YP_001227800.1. NC_009482.1.

    Genome annotation databases

    EnsemblBacteriaiCAK28447; CAK28447; SynRCC307_1544.
    GeneIDi5157958.
    KEGGisyr:SynRCC307_1544.
    PATRICi23824015. VBISynSp108374_1557.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CT978603 Genomic DNA. Translation: CAK28447.1 .
    RefSeqi WP_011935961.1. NC_009482.1.
    YP_001227800.1. NC_009482.1.

    3D structure databases

    ProteinModelPortali A5GU88.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 316278.SynRCC307_1544.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai CAK28447 ; CAK28447 ; SynRCC307_1544 .
    GeneIDi 5157958.
    KEGGi syr:SynRCC307_1544.
    PATRICi 23824015. VBISynSp108374_1557.

    Phylogenomic databases

    eggNOGi COG0076.
    HOGENOMi HOG000070228.
    KOi K01580.
    OMAi MIGRLFN.
    OrthoDBi EOG6TFCPW.

    Family and domain databases

    Gene3Di 3.40.640.10. 1 hit.
    3.90.1150.10. 1 hit.
    InterProi IPR010107. Glutamate_decarboxylase.
    IPR002129. PyrdxlP-dep_de-COase.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    IPR015422. PyrdxlP-dep_Trfase_major_sub2.
    [Graphical view ]
    PANTHERi PTHR11999:SF1. PTHR11999:SF1. 1 hit.
    Pfami PF00282. Pyridoxal_deC. 1 hit.
    [Graphical view ]
    SUPFAMi SSF53383. SSF53383. 1 hit.
    TIGRFAMsi TIGR01788. Glu-decarb-GAD. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Genoscope
      Submitted (MAY-2006) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: RCC307Imported.

    Entry informationi

    Entry nameiA5GU88_SYNR3
    AccessioniPrimary (citable) accession number: A5GU88
    Entry historyi
    Integrated into UniProtKB/TrEMBL: June 12, 2007
    Last sequence update: June 12, 2007
    Last modified: October 1, 2014
    This is version 44 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3