A5GU88 (A5GU88_SYNR3) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Glutamate decarboxylase EMBL CAK28447.1
EC=4.1.1.15 EMBL CAK28447.1

Gene names

Name:	gadA EMBL CAK28447.1
Ordered Locus Names:	SynRCC307_1544

Organism

Synechococcus sp. (strain RCC307) [Complete proteome] [HAMAP]

Taxonomic identifier

316278 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Cyanobacteria › Oscillatoriophycideae › Chroococcales › Synechococcus

Protein attributes

Sequence length	464 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Cofactor	Pyridoxal phosphate By similarity. RuleBase RU000382
Sequence similarities	Belongs to the group II decarboxylase family. RuleBase RU000382

Ontologies

Keywords
Ligand	Pyridoxal phosphate RuleBase RU000382
Molecular function	Lyase RuleBase RU000382 EMBL CAK28447.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	glutamate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	glutamate decarboxylase activity Inferred from electronic annotation. Source: EC pyridoxal phosphate binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A5GU88 [UniParc]. Last modified June 12, 2007. Version 1. Checksum: 6EDED4C0D2D802FE	FASTA	464	51,943
	10 20 30 40 50 60 METSRPGLDL ETNLGHRLQQ RNHTDAVLPR DQLAKHGLHA DLAYQLIHDH LMLDGNAMLN 70 80 90 100 110 120 LATFVGTWME PEALHLMREC ADKNMIDKDE YPQTAELENR CLRMLARLWN APDPEAAVGT 130 140 150 160 170 180 STTGSSEACM LGGMVLRWHW RQRRAAQGLD DRRPNLVMGT NTQICWDKFC AYFDVEARMV 190 200 210 220 230 240 PISRDHLQMT AEGAVAACDE NTIGVVGVLG STFDGSYEPI EAIQQGLDQL QERTGLDIPI 250 260 270 280 290 300 HVDGASGAFV APFNSPELPW DFRLPRVKSI NTSGHKYGGV LPGVGWVLWR EQADLPEELR 310 320 330 340 350 360 FNVNYLGGQM PTIGMNFSRP GAQVVAQYFN FIHLGHAGYC QRMACLEATA SYLADSIAAM 370 380 390 400 410 420 APMKLLSHPR GQLPVFAVTL EDSVDTWTVF QLSERLRARG WQVPAYTMPA ACEDLAVLRF 430 440 450 460 VIRAGFTRDM ADLLLRDLQN AVDWFQQLSS PMPDPNPEHR PFHH

References

[1]	Genoscope Submitted (MAY-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: RCC307.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CT978603 Genomic DNA. Translation: CAK28447.1.
RefSeq	YP_001227800.1. NC_009482.1.
3D structure databases
ProteinModelPortal	A5GU88.
ModBase	Search...
Protein-protein interaction databases
STRING	316278.SynRCC307_1544.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	CAK28447; CAK28447; SynRCC307_1544.
GeneID	5157958.
KEGG	syr:SynRCC307_1544.
PATRIC	23824015. VBISynSp108374_1557.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0076.
HOGENOM	HOG000070228.
KO	K01580.
OMA	PMDKEHM.
Family and domain databases
Gene3D	3.40.640.10. 1 hit. 3.90.1150.10. 1 hit.
InterPro	IPR010107. Glutamate_decarboxylase. IPR002129. PyrdxlP-dep_de-COase. IPR015424. PyrdxlP-dep_Trfase. IPR015421. PyrdxlP-dep_Trfase_major_sub1. IPR015422. PyrdxlP-dep_Trfase_major_sub2. [Graphical view]
PANTHER	PTHR11999:SF1. PTHR11999:SF1. 1 hit.
Pfam	PF00282. Pyridoxal_deC. 1 hit. [Graphical view]
SUPFAM	SSF53383. PyrdxlP-dep_Trfase_major. 1 hit.
TIGRFAMs	TIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNet	Search...

Entry information

Entry name

A5GU88_SYNR3

Accession

Primary (citable) accession number: A5GU88

Entry history

Integrated into UniProtKB/TrEMBL:	June 12, 2007
Last sequence update:	June 12, 2007
Last modified:	May 1, 2013
This is version 39 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)