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A5GU88 (A5GU88_SYNR3) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 42. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=4.1.1.15 EMBL CAK28447.1
Gene names
Name:gadA EMBL CAK28447.1
Ordered Locus Names:SynRCC307_1544 EMBL CAK28447.1
OrganismSynechococcus sp. (strain RCC307) [Complete proteome] [HAMAP] EMBL CAK28447.1
Taxonomic identifier316278 [NCBI]
Taxonomic lineageBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechococcus

Protein attributes

Sequence length464 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

Pyridoxal phosphate By similarity. RuleBase RU000382

Sequence similarities

Belongs to the group II decarboxylase family. RuleBase RU000382

Sequences

Sequence LengthMass (Da)Tools
A5GU88 [UniParc].

Last modified June 12, 2007. Version 1.
Checksum: 6EDED4C0D2D802FE

FASTA46451,943
        10         20         30         40         50         60 
METSRPGLDL ETNLGHRLQQ RNHTDAVLPR DQLAKHGLHA DLAYQLIHDH LMLDGNAMLN 

        70         80         90        100        110        120 
LATFVGTWME PEALHLMREC ADKNMIDKDE YPQTAELENR CLRMLARLWN APDPEAAVGT 

       130        140        150        160        170        180 
STTGSSEACM LGGMVLRWHW RQRRAAQGLD DRRPNLVMGT NTQICWDKFC AYFDVEARMV 

       190        200        210        220        230        240 
PISRDHLQMT AEGAVAACDE NTIGVVGVLG STFDGSYEPI EAIQQGLDQL QERTGLDIPI 

       250        260        270        280        290        300 
HVDGASGAFV APFNSPELPW DFRLPRVKSI NTSGHKYGGV LPGVGWVLWR EQADLPEELR 

       310        320        330        340        350        360 
FNVNYLGGQM PTIGMNFSRP GAQVVAQYFN FIHLGHAGYC QRMACLEATA SYLADSIAAM 

       370        380        390        400        410        420 
APMKLLSHPR GQLPVFAVTL EDSVDTWTVF QLSERLRARG WQVPAYTMPA ACEDLAVLRF 

       430        440        450        460 
VIRAGFTRDM ADLLLRDLQN AVDWFQQLSS PMPDPNPEHR PFHH 

« Hide

References

[1]Genoscope
Submitted (MAY-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: RCC307.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CT978603 Genomic DNA. Translation: CAK28447.1.
RefSeqYP_001227800.1. NC_009482.1.

3D structure databases

ProteinModelPortalA5GU88.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING316278.SynRCC307_1544.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCAK28447; CAK28447; SynRCC307_1544.
GeneID5157958.
KEGGsyr:SynRCC307_1544.
PATRIC23824015. VBISynSp108374_1557.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0076.
HOGENOMHOG000070228.
KOK01580.
OMAMIGRLFN.
OrthoDBEOG6TFCPW.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PANTHERPTHR11999:SF1. PTHR11999:SF1. 1 hit.
PfamPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMSSF53383. SSF53383. 1 hit.
TIGRFAMsTIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNetSearch...

Entry information

Entry nameA5GU88_SYNR3
AccessionPrimary (citable) accession number: A5GU88
Entry history
Integrated into UniProtKB/TrEMBL: June 12, 2007
Last sequence update: June 12, 2007
Last modified: May 14, 2014
This is version 42 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)