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A5GRH9 (A5GRH9_SYNR3) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 31. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Glycine--tRNA ligase alpha subunit HAMAP MF_00254
EC=6.1.1.14 HAMAP MF_00254
Alternative name(s):
Glycyl-tRNA synthetase alpha subunit HAMAP MF_00254
Gene names
Name:glyQ HAMAP MF_00254 EMBL CAK27488.1
Ordered Locus Names:SynRCC307_0585
OrganismSynechococcus sp. (strain RCC307) [Complete proteome] [HAMAP]
Taxonomic identifier316278 [NCBI]
Taxonomic lineageBacteria › Cyanobacteria › Chroococcales › Synechococcus

Protein attributes

Sequence length293 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + glycine + tRNA(Gly) = AMP + diphosphate + glycyl-tRNA(Gly). HAMAP MF_00254 SAAS SAAS002310

Subunit structure

Tetramer of two alpha and two beta subunits By similarity. HAMAP MF_00254 SAAS SAAS002310

Subcellular location

Cytoplasm By similarity HAMAP MF_00254.

Sequence similarities

Belongs to the class-II aminoacyl-tRNA synthetase family. HAMAP MF_00254

Sequences

Sequence LengthMass (Da)Tools
A5GRH9 [UniParc].

Last modified June 12, 2007. Version 1.
Checksum: 00032B0DC48F7C63

FASTA29333,367
        10         20         30         40         50         60 
MPIAVQFQDI ISTLQRFWAD QGCLVLQPYD TEKGAGTMSP HTVLRAIGPE PWAVAYAEPC 

        70         80         90        100        110        120 
RRPTDGRYGD NPNRAQHYFQ FQVLIKPSPD GIQETYLRSL EALGIKAADH DIRFVEDNWE 

       130        140        150        160        170        180 
SPTLGAWGVG WEVWLDGMEV TQFTYFQQCG GIDCKPVSIE ITYGLERLAM YLQDVESLWE 

       190        200        210        220        230        240 
LQWDSQRSYG DIWLPFEKGQ CTYNFEASNP ERLFKLFEIY EAEAKDLCEQ GLAAPALDWV 

       250        260        270        280        290 
LKCSHTFNLL EARGVISVTE RTATIGRIRN LARQVAESWL AEREALGFPL LKG

« Hide

References

[1]Genoscope
Submitted (MAY-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CT978603 Genomic DNA. Translation: CAK27488.1.
RefSeqYP_001226841.1. NC_009482.1.

3D structure databases

ProteinModelPortalA5GRH9.
SMRA5GRH9. Positions 7-280.
ModBaseSearch...

Protein-protein interaction databases

STRINGA5GRH9.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID5157213.
GenomeReviewsGene locus SynRCC307_0585 in contig CT978603_GR.
KEGGsyr:SynRCC307_0585.
PATRIC23822024. VBISynSp108374_0575.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0752.
HOGENOMHBG285316.
OMACRRPTDG.
PhylomeDBA5GRH9.
ProtClustDBPRK09348.

Family and domain databases

HAMAPMF_00254. Gly_tRNA_synth_alpha.
[Tree]
InterProIPR006194. Gly-tRNA-synth_II_heterodimer.
IPR002310. Gly-tRNA_synth_IIc_asu.
[Graphical view]
KOK01878.
PfamPF02091. tRNA-synt_2e. 1 hit.
[Graphical view]
PRINTSPR01044. TRNASYNTHGA.
TIGRFAMsTIGR00388. GlyQ. 1 hit.
PROSITEPS50861. AA_TRNA_LIGASE_II_GLYAB. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA5GRH9_SYNR3
AccessionPrimary (citable) accession number: A5GRH9
Entry history
Integrated into UniProtKB/TrEMBL: June 12, 2007
Last sequence update: June 12, 2007
Last modified: January 25, 2012
This is version 31 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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