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A5GQR9 (A5GQR9_SYNR3) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 47. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Superoxide dismutase [Cu-Zn] RuleBase RU000393

EC=1.15.1.1 RuleBase RU000393
Gene names
Name:sodC EMBL CAK27228.1
Ordered Locus Names:SynRCC307_0325 EMBL CAK27228.1
OrganismSynechococcus sp. (strain RCC307) [Complete proteome] [HAMAP] EMBL CAK27228.1
Taxonomic identifier316278 [NCBI]
Taxonomic lineageBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechococcus

Protein attributes

Sequence length175 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Destroys radicals which are normally produced within the cells and which are toxic to biological systems By similarity. RuleBase RU000393

Catalytic activity

2 superoxide + 2 H+ = O2 + H2O2. RuleBase RU000393

Cofactor

Binds 1 copper ion per subunit By similarity. RuleBase RU000393

Binds 1 zinc ion per subunit By similarity. RuleBase RU000393

Sequence similarities

Belongs to the Cu-Zn superoxide dismutase family. RuleBase RU000393

Sequences

Sequence LengthMass (Da)Tools
A5GQR9 [UniParc].

Last modified June 12, 2007. Version 1.
Checksum: E9F6D807EE43DC2E

FASTA17517,810
        10         20         30         40         50         60 
MRLLLSLLLF LSLLVPSMPA LAAEQQVWIQ RIGGEESGEV LGSVMARDTS DGLVISPSIS 

        70         80         90        100        110        120 
GLAAGAYGFH LHENGSCESG LKDGVEVAGL AAGGHWDPDN TGSHQGPFGV GHRGDLSRLV 

       130        140        150        160        170 
INADGTSTTP VVAPRLSVDD LKGRAFIVHA GGDTYSDEPP LGGGGARIAC GVAGE 

« Hide

References

[1]Genoscope
Submitted (MAY-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: RCC307.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CT978603 Genomic DNA. Translation: CAK27228.1.
RefSeqYP_001226581.1. NC_009482.1.

3D structure databases

ProteinModelPortalA5GQR9.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING316278.SynRCC307_0325.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCAK27228; CAK27228; SynRCC307_0325.
GeneID5158606.
KEGGsyr:SynRCC307_0325.
PATRIC23821478. VBISynSp108374_0313.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG2032.
HOGENOMHOG000263449.
KOK04565.
OMADHPKPLG.
OrthoDBEOG6K13RS.
ProtClustDBCLSK842311.

Family and domain databases

Gene3D2.60.40.200. 1 hit.
InterProIPR024134. SOD_Cu/Zn_/chaperone.
IPR018152. SOD_Cu/Zn_BS.
IPR001424. SOD_Cu_Zn_dom.
[Graphical view]
PANTHERPTHR10003. PTHR10003. 1 hit.
PfamPF00080. Sod_Cu. 1 hit.
[Graphical view]
SUPFAMSSF49329. SSF49329. 1 hit.
PROSITEPS00087. SOD_CU_ZN_1. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA5GQR9_SYNR3
AccessionPrimary (citable) accession number: A5GQR9
Entry history
Integrated into UniProtKB/TrEMBL: June 12, 2007
Last sequence update: June 12, 2007
Last modified: November 13, 2013
This is version 47 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)