A5GQN1 (A5GQN1_SYNR3) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
3-deoxy-manno-octulosonate cytidylyltransferase EMBL CAK27190.1
EC=2.7.7.38 EMBL CAK27190.1

Gene names

Name:	kdsB EMBL CAK27190.1
Ordered Locus Names:	SynRCC307_0287

Organism

Synechococcus sp. (strain RCC307) [Complete proteome] [HAMAP]

Taxonomic identifier

316278 [NCBI]

Taxonomic lineage

Bacteria › Cyanobacteria › Chroococcales › Synechococcus

Protein attributes

Sequence length	262 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria By similarity. SAAS SAAS004528
Catalytic activity	CTP + 3-deoxy-D-manno-octulosonate = diphosphate + CMP-3-deoxy-D-manno-octulosonate. SAAS SAAS004528
Pathway	Bacterial outer membrane biogenesis; lipopolysaccharide biosynthesis. SAAS SAAS004528 Nucleotide-sugar biosynthesis; CMP-3-deoxy-D-manno-octulosonate biosynthesis; CMP-3-deoxy-D-manno-octulosonate from 3-deoxy-D-manno-octulosonate and CTP: step 1/1. SAAS SAAS004528
Subcellular location	Cytoplasm By similarity SAAS SAAS004528.

Ontologies

Keywords
Biological process	Lipopolysaccharide biosynthesis SAAS SAAS004528
Cellular component	Cytoplasm SAAS SAAS004528
Molecular function	Nucleotidyltransferase SAAS SAAS004528 EMBL CAK27190.1 Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	lipopolysaccharide biosynthetic process Inferred from electronic annotation. Source: UniProtKB-KW
Cellular component	cytoplasm Inferred from electronic annotation. Source: UniProtKB-SubCell
Molecular function	3-deoxy-manno-octulosonate cytidylyltransferase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A5GQN1 [UniParc]. Last modified June 12, 2007. Version 1. Checksum: EA557BA0F2C2997A	FASTA	262	28,677
	10 20 30 40 50 60 MNHPTTVVAI PARLESKRLP RKLLADVGGK PLLQRVLERC LEAQHPAAVV LCTDSEELRD 70 80 90 100 110 120 KAGQWPLARP VPVVMTPASC SSGSERLACA LPELLELAGS NDPAHCWVLN VQGDQPFVDP 130 140 150 160 170 180 NIIDAMAERC SEARSDVLTP VYRLPPEKIH NPAVVKCLLA HDGRCLTFSR SALPHVRDVP 190 200 210 220 230 240 PEQWHAHAPY WGHVGIYGYR AEVLAQWNDM PASPLEAIEK LEQLKLLEAG IAIGSFPVEA 250 260 DSLSVDTAEQ LEEARAIAAQ LR

References

[1]	Genoscope Submitted (MAY-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CT978603 Genomic DNA. Translation: CAK27190.1.
RefSeq	YP_001226543.1. NC_009482.1.
3D structure databases
ProteinModelPortal	A5GQN1.
ModBase	Search...
Protein-protein interaction databases
STRING	A5GQN1.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5157710.
GenomeReviews	Gene locus SynRCC307_0287 in contig CT978603_GR.
KEGG	syr:SynRCC307_0287.
PATRIC	23821404. VBISynSp108374_0276.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG1212.
HOGENOM	HBG637773.
OMA	INVQADE.
PhylomeDB	A5GQN1.
ProtClustDB	PRK05450.
Family and domain databases
InterPro	IPR003329. Cytidylyl_trans. IPR004528. KdsB. [Graphical view]
KO	K00979.
PANTHER	PTHR21485:SF4. PTHR21485:SF4. 1 hit.
Pfam	PF02348. CTP_transf_3. 1 hit. [Graphical view]
TIGRFAMs	TIGR00466. KdsB. 1 hit.
ProtoNet	Search...

Entry information

Entry name

A5GQN1_SYNR3

Accession

Primary (citable) accession number: A5GQN1

Entry history

Integrated into UniProtKB/TrEMBL:	June 12, 2007
Last sequence update:	June 12, 2007
Last modified:	December 14, 2011
This is version 24 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)