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A5GMK3 (A5GMK3_SYNPW) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 40. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Superoxide dismutase RuleBase RU000414

EC=1.15.1.1 RuleBase RU000414
Gene names
Name:sodB EMBL CAK24168.1
Ordered Locus Names:SynWH7803_1742 EMBL CAK24168.1
OrganismSynechococcus sp. (strain WH7803) [Complete proteome] [HAMAP]
Taxonomic identifier32051 [NCBI]
Taxonomic lineageBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechococcus

Protein attributes

Sequence length199 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Destroys radicals which are normally produced within the cells and which are toxic to biological systems By similarity.

Catalytic activity

2 superoxide + 2 H+ = O2 + H2O2.

Sequence similarities

Belongs to the iron/manganese superoxide dismutase family. RuleBase RU004477

Ontologies

Keywords
   Molecular functionOxidoreductase RuleBase RU000414 EMBL CAK24168.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processsuperoxide metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functionmetal ion binding

Inferred from electronic annotation. Source: InterPro

superoxide dismutase activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
A5GMK3 [UniParc].

Last modified June 12, 2007. Version 1.
Checksum: 7F458D3FA1902BCB

FASTA19921,798
        10         20         30         40         50         60 
MAHTLPALPY ALDALEPHIS RSTLEFHHGK HHNGYVTNLN KAIEGTDLDG KSLEEVISAV 

        70         80         90        100        110        120 
SGDASKAGVF NNAAQVWNHS FYWQCMKPGG GGQPSGALLD KINADFGSYD AFVEQFKAAG 

       130        140        150        160        170        180 
ATQFGSGWAW LIVENGTLKI TKTANADLPL AHGQKALLTM DVWEHAYYLD YQNRRPDYIT 

       190 
TYLEKLVNWD FVAANLAAA 

« Hide

References

[1]Genoscope
Submitted (MAY-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: WH7803.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CT971583 Genomic DNA. Translation: CAK24168.1.
RefSeqYP_001225465.1. NC_009481.1.

3D structure databases

ProteinModelPortalA5GMK3.
SMRA5GMK3. Positions 8-198.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING32051.SynWH7803_1742.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCAK24168; CAK24168; SynWH7803_1742.
GeneID5145930.
KEGGsyx:SynWH7803_1742.
PATRIC23829661. VBISynSp43824_1785.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0605.
HOGENOMHOG000013584.
KOK04564.
OMADYVLERY.
OrthoDBEOG63NMNT.
ProtClustDBCLSK971093.

Family and domain databases

InterProIPR001189. Mn/Fe_SOD.
IPR019833. Mn/Fe_SOD_BS.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
[Graphical view]
PANTHERPTHR11404. PTHR11404. 1 hit.
PfamPF02777. Sod_Fe_C. 1 hit.
PF00081. Sod_Fe_N. 1 hit.
[Graphical view]
PIRSFPIRSF000349. SODismutase. 1 hit.
PRINTSPR01703. MNSODISMTASE.
SUPFAMSSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 1 hit.
PROSITEPS00088. SOD_MN. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA5GMK3_SYNPW
AccessionPrimary (citable) accession number: A5GMK3
Entry history
Integrated into UniProtKB/TrEMBL: June 12, 2007
Last sequence update: June 12, 2007
Last modified: November 13, 2013
This is version 40 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)