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A5GMK3

- A5GMK3_SYNPW

UniProt

A5GMK3 - A5GMK3_SYNPW

Protein

Superoxide dismutase

Gene

sodB

Organism
Synechococcus sp. (strain WH7803)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 44 (01 Oct 2014)
      Sequence version 1 (12 Jun 2007)
      Previous versions | rss
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    Functioni

    Destroys radicals which are normally produced within the cells and which are toxic to biological systems.UniRule annotation
    Destroys radicals which are normally produced within the cells and which are toxic to biological systems By similarity.

    Catalytic activityi

    2 superoxide + 2 H+ = O2 + H2O2.UniRule annotation

    GO - Molecular functioni

    1. metal ion binding Source: InterPro
    2. superoxide dismutase activity Source: UniProtKB-EC

    Keywords - Molecular functioni

    OxidoreductaseUniRule annotationImported

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Superoxide dismutaseUniRule annotation (EC:1.15.1.1UniRule annotation)
    Gene namesi
    Name:sodBImported
    Ordered Locus Names:SynWH7803_1742Imported
    OrganismiSynechococcus sp. (strain WH7803)Imported
    Taxonomic identifieri32051 [NCBI]
    Taxonomic lineageiBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechococcus
    ProteomesiUP000001566: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi32051.SynWH7803_1742.

    Structurei

    3D structure databases

    ProteinModelPortaliA5GMK3.
    SMRiA5GMK3. Positions 8-198.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the iron/manganese superoxide dismutase family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0605.
    HOGENOMiHOG000013584.
    KOiK04564.
    OMAiPIFTADV.
    OrthoDBiEOG63NMNT.

    Family and domain databases

    InterProiIPR001189. Mn/Fe_SOD.
    IPR019833. Mn/Fe_SOD_BS.
    IPR019832. Mn/Fe_SOD_C.
    IPR019831. Mn/Fe_SOD_N.
    [Graphical view]
    PANTHERiPTHR11404. PTHR11404. 1 hit.
    PfamiPF02777. Sod_Fe_C. 1 hit.
    PF00081. Sod_Fe_N. 1 hit.
    [Graphical view]
    PIRSFiPIRSF000349. SODismutase. 1 hit.
    PRINTSiPR01703. MNSODISMTASE.
    SUPFAMiSSF46609. SSF46609. 1 hit.
    SSF54719. SSF54719. 1 hit.
    PROSITEiPS00088. SOD_MN. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    A5GMK3-1 [UniParc]FASTAAdd to Basket

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    MAHTLPALPY ALDALEPHIS RSTLEFHHGK HHNGYVTNLN KAIEGTDLDG    50
    KSLEEVISAV SGDASKAGVF NNAAQVWNHS FYWQCMKPGG GGQPSGALLD 100
    KINADFGSYD AFVEQFKAAG ATQFGSGWAW LIVENGTLKI TKTANADLPL 150
    AHGQKALLTM DVWEHAYYLD YQNRRPDYIT TYLEKLVNWD FVAANLAAA 199
    Length:199
    Mass (Da):21,798
    Last modified:June 12, 2007 - v1
    Checksum:i7F458D3FA1902BCB
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CT971583 Genomic DNA. Translation: CAK24168.1.
    RefSeqiWP_011933640.1. NC_009481.1.
    YP_001225465.1. NC_009481.1.

    Genome annotation databases

    EnsemblBacteriaiCAK24168; CAK24168; SynWH7803_1742.
    GeneIDi5145930.
    KEGGisyx:SynWH7803_1742.
    PATRICi23829661. VBISynSp43824_1785.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CT971583 Genomic DNA. Translation: CAK24168.1 .
    RefSeqi WP_011933640.1. NC_009481.1.
    YP_001225465.1. NC_009481.1.

    3D structure databases

    ProteinModelPortali A5GMK3.
    SMRi A5GMK3. Positions 8-198.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 32051.SynWH7803_1742.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai CAK24168 ; CAK24168 ; SynWH7803_1742 .
    GeneIDi 5145930.
    KEGGi syx:SynWH7803_1742.
    PATRICi 23829661. VBISynSp43824_1785.

    Phylogenomic databases

    eggNOGi COG0605.
    HOGENOMi HOG000013584.
    KOi K04564.
    OMAi PIFTADV.
    OrthoDBi EOG63NMNT.

    Family and domain databases

    InterProi IPR001189. Mn/Fe_SOD.
    IPR019833. Mn/Fe_SOD_BS.
    IPR019832. Mn/Fe_SOD_C.
    IPR019831. Mn/Fe_SOD_N.
    [Graphical view ]
    PANTHERi PTHR11404. PTHR11404. 1 hit.
    Pfami PF02777. Sod_Fe_C. 1 hit.
    PF00081. Sod_Fe_N. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF000349. SODismutase. 1 hit.
    PRINTSi PR01703. MNSODISMTASE.
    SUPFAMi SSF46609. SSF46609. 1 hit.
    SSF54719. SSF54719. 1 hit.
    PROSITEi PS00088. SOD_MN. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Genoscope
      Submitted (MAY-2006) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: WH7803Imported.

    Entry informationi

    Entry nameiA5GMK3_SYNPW
    AccessioniPrimary (citable) accession number: A5GMK3
    Entry historyi
    Integrated into UniProtKB/TrEMBL: June 12, 2007
    Last sequence update: June 12, 2007
    Last modified: October 1, 2014
    This is version 44 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3