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A5GJN1 (A5GJN1_SYNPW) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 35. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Dihydroorotase RuleBase RU003440
EC=3.5.2.3 RuleBase RU003440
Gene names
Name:pyrC EMBL CAK23146.1
Ordered Locus Names:SynWH7803_0720
OrganismSynechococcus sp. (strain WH7803) [Complete proteome] [HAMAP]
Taxonomic identifier32051 [NCBI]
Taxonomic lineageBacteria › Cyanobacteria › Chroococcales › Synechococcus

Protein attributes

Sequence length363 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

(S)-dihydroorotate + H2O = N-carbamoyl-L-aspartate. RuleBase RU003440 SAAS SAAS004721

Cofactor

Binds 2 zinc ions per subunit By similarity. RuleBase RU003440 SAAS SAAS004721

Pathway

Pyrimidine metabolism; UMP biosynthesis via de novo pathway; (S)-dihydroorotate from bicarbonate: step 3/3. RuleBase RU003440 SAAS SAAS004721

Subunit structure

Homodimer By similarity. SAAS SAAS004721

Sequence similarities

Belongs to the DHOase family. Type 1 subfamily. RuleBase RU003440

Sequences

Sequence LengthMass (Da)Tools
A5GJN1 [UniParc].

Last modified June 12, 2007. Version 1.
Checksum: 6774B4F00DF48471

FASTA36339,997
        10         20         30         40         50         60 
MQDSSSQLVI RRPDDWHVHL RDGAMLKAVA PATARVFARA VVMPNLKPPV TTVDQARAYR 

        70         80         90        100        110        120 
QRIVEAVPAD VRFEPLMTAY LTDHIDPAEL ERGFSEGVFT AAKLYPANAT TNSAAGVSDL 

       130        140        150        160        170        180 
SRISKVLERM EAIDMPLLIH GEVTDADVDV FDREAAFIES HLIPLRQRYP SLRIVLEHIT 

       190        200        210        220        230        240 
TEQAVDFIRT ESLAGDSRLA ATITPHHLHL NRNAMFLGGL RSDFYCLPVV KRECHRRALV 

       250        260        270        280        290        300 
KAATSGLSCF FLGTDSAPHP RSGKESSCGC AGIFNAVHAL ESYAAVFEQE GALEHLQGFA 

       310        320        330        340        350        360 
SEHGPRFYGL PLNNESLTLV KRQQTVPKTL EDSGLEAGEW PVLFHAGETL NWSVHVDGQA 


ETN

« Hide

References

[1]Genoscope
Submitted (MAY-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CT971583 Genomic DNA. Translation: CAK23146.1.
RefSeqYP_001224443.1. NC_009481.1.

3D structure databases

ProteinModelPortalA5GJN1.
SMRA5GJN1. Positions 5-354.
ModBaseSearch...

Protein-protein interaction databases

STRINGA5GJN1.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID5146985.
GenomeReviewsGene locus SynWH7803_0720 in contig CT971583_GR.
KEGGsyx:SynWH7803_0720.
PATRIC23827547. VBISynSp43824_0739.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0418.
HOGENOMHBG628648.
OMACLPVAKR.
ProtClustDBPRK05451.

Enzyme and pathway databases

BioCycSSP32051:SYNWH7803_0720-MONOMER.

Family and domain databases

HAMAPMF_00219. PyrC_type1.
[Tree]
InterProIPR006680. Amidohydro_1.
IPR004721. DHOdimr.
IPR002195. Dihydroorotase_CS.
[Graphical view]
KOK01465.
PfamPF01979. Amidohydro_1. 1 hit.
[Graphical view]
PIRSFPIRSF001237. DHOdimr. 1 hit.
TIGRFAMsTIGR00856. PyrC_dimer. 1 hit.
PROSITEPS00482. DIHYDROOROTASE_1. 1 hit.
PS00483. DIHYDROOROTASE_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA5GJN1_SYNPW
AccessionPrimary (citable) accession number: A5GJN1
Entry history
Integrated into UniProtKB/TrEMBL: June 12, 2007
Last sequence update: June 12, 2007
Last modified: December 14, 2011
This is version 35 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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