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A5GJ56 (A5GJ56_SYNPW) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 39. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=5.4.99.16 EMBL CAK22971.1
Gene names
Ordered Locus Names:SynWH7803_0545 EMBL CAK22971.1
OrganismSynechococcus sp. (strain WH7803) [Complete proteome] [HAMAP]
Taxonomic identifier32051 [NCBI]
Taxonomic lineageBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechococcus

Protein attributes

Sequence length556 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
A5GJ56 [UniParc].

Last modified June 12, 2007. Version 1.
Checksum: CD84B16653C87EB5

FASTA55662,962
        10         20         30         40         50         60 
MPKQQPWWNG AVIYQLIVRS YADGNGDGVG DLQGLASRLP YLRWLGVEAI WLTPVYPSPL 

        70         80         90        100        110        120 
QDGGYDITDF KAIHPDLGDL AAFHRFLTAA HGQGLKVVMD LVLNHTSTLH PWFQRARWAP 

       130        140        150        160        170        180 
QGTPEREVYV WSDDPHRYAD APVLFRHFES SNWEWDDVAG QYYLHRFLRH QPDLNYANPL 

       190        200        210        220        230        240 
VQEEMLEVVD FWIERGVDGF RLDAVPFLCE EENSRCEGLP ETHAFLKRLR ERVDSHGRDV 

       250        260        270        280        290        300 
LLLAEAIQPV KEAAPYLADD ELHGAFNFVL TAHLFAAIAS GSTEHLRQCL QDAQDAVCGC 

       310        320        330        340        350        360 
RWALPLRNHD ELWLGDGHLI PEEVIQIIRA GLHQGQGHWL NWGINRRLAP LLNGDPGSNR 

       370        380        390        400        410        420 
VLHGLLYSLP GMPCLYYGDE LGMGDWPGLR DRDPNRTPMA WTPARNGGFS SAPDPLLVLP 

       430        440        450        460        470        480 
PITAPGYDYR VVNVEVQKQL PGSLLNWHRR MLTCRRLLPA LRHGDFELLP SVHPSVLSYV 

       490        500        510        520        530        540 
RCDGRMTVLV AANLSAAGAS LQLDLSRWEG ERTREVMWGC EYPPASANWF VYLPAHGFNW 

       550 
WLLGEVEEQS DGLQDS 

« Hide

References

[1]Genoscope
Submitted (MAY-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: WH7803.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CT971583 Genomic DNA. Translation: CAK22971.1.
RefSeqYP_001224268.1. NC_009481.1.

3D structure databases

ProteinModelPortalA5GJ56.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING32051.SynWH7803_0545.

Protein family/group databases

CAZyGH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCAK22971; CAK22971; SynWH7803_0545.
GeneID5146878.
KEGGsyx:SynWH7803_0545.
PATRIC23827181. VBISynSp43824_0557.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0366.
HOGENOMHOG000220639.
KOK05343.
OMAHANDYEL.
OrthoDBEOG6RVFV2.

Family and domain databases

Gene3D2.60.40.1180. 1 hit.
3.20.20.80. 3 hits.
InterProIPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
[Graphical view]
SMARTSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMSSF51445. SSF51445. 2 hits.
ProtoNetSearch...

Entry information

Entry nameA5GJ56_SYNPW
AccessionPrimary (citable) accession number: A5GJ56
Entry history
Integrated into UniProtKB/TrEMBL: June 12, 2007
Last sequence update: June 12, 2007
Last modified: May 14, 2014
This is version 39 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)