A5GIS8 (RL15_SYNPW) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
50S ribosomal protein L15

Gene names

Name:	rplO
Ordered Locus Names:	SynWH7803_0417

Organism

Synechococcus sp. (strain WH7803) [Complete proteome] [HAMAP]

Taxonomic identifier

32051 [NCBI]

Taxonomic lineage

Bacteria › Cyanobacteria › Chroococcales › Synechococcus

Protein attributes

Sequence length	150 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Binds to the 23S rRNA By similarity. HAMAP MF_01341_B
Subunit structure	Part of the 50S ribosomal subunit.
Sequence similarities	Belongs to the ribosomal protein L15P family.

Ontologies

Keywords
Ligand	RNA-binding rRNA-binding
Molecular function	Ribonucleoprotein Ribosomal protein
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	translation Inferred from electronic annotation. Source: InterPro
Cellular component	large ribosomal subunit Inferred from electronic annotation. Source: InterPro
Molecular function	rRNA binding Inferred from electronic annotation. Source: UniProtKB-KW structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 150	150	50S ribosomal protein L15 HAMAP MF_01341_B		PRO_1000073318

Sequences

	Sequence		Length	Mass (Da)
	A5GIS8 [UniParc]. Last modified June 12, 2007. Version 1. Checksum: 10455F079162815D	FASTA	150	16,025
	10 20 30 40 50 60 MTLRLESLKS NKGARRRKLR KGRGIAAGQG ASCGFGMRGQ KSRSGRPTRP GFEGGQMPLY 70 80 90 100 110 120 RRVPKLKHFP LVNPKQFTVV NVSALNDLKA GSTVSLDSLV KDGIVTSPKH PLKILGNGEL 130 140 150 KTKLTVQAAA FTASARTKIE AAGGTCELPE

References

[1]	Genoscope Submitted (MAY-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: WH7803.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CT971583 Genomic DNA. Translation: CAK22843.1.
RefSeq	YP_001224140.1. NC_009481.1.
3D structure databases
ProteinModelPortal	A5GIS8.
ModBase	Search...
Protein-protein interaction databases
STRING	A5GIS8.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5146522.
GenomeReviews	Gene locus SynWH7803_0417 in contig CT971583_GR.
KEGG	syx:SynWH7803_0417.
PATRIC	23826890. VBISynSp43824_0422.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0200.
HOGENOM	HBG727142.
OMA	RKGRGHA.
PhylomeDB	A5GIS8.
ProtClustDB	PRK05592.
Enzyme and pathway databases
BioCyc	SSP32051:SYNWH7803_0417-MONOMER.
Family and domain databases
HAMAP	MF_01341_B. Ribosomal_L15_B. [Tree]
InterPro	IPR005749. Ribosomal_L15_bac-type. IPR001196. Ribosomal_L15_CS. IPR021131. Ribosomal_L18e/L15P. [Graphical view]
KO	K02876.
PANTHER	PTHR12934. Ribosom_L15_bac. 1 hit.
Pfam	PF00828. Ribosomal_L18e. 1 hit. [Graphical view]
SUPFAM	SSF52080. Ribosomal_L18e/L15. 1 hit.
TIGRFAMs	TIGR01071. RplO_bact. 1 hit.
PROSITE	PS00475. RIBOSOMAL_L15. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

RL15_SYNPW

Accession

Primary (citable) accession number: A5GIS8

Entry history

Integrated into UniProtKB/Swiss-Prot:	February 26, 2008
Last sequence update:	June 12, 2007
Last modified:	December 14, 2011
This is version 30 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program