A5GIS1 (RL17_SYNPW) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
50S ribosomal protein L17

Gene names

Name:	rplQ
Synonyms:	rpl17
Ordered Locus Names:	SynWH7803_0410

Organism

Synechococcus sp. (strain WH7803) [Complete proteome] [HAMAP]

Taxonomic identifier

32051 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Cyanobacteria › Oscillatoriophycideae › Chroococcales › Synechococcus

Protein attributes

Sequence length	116 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Subunit structure	Part of the 50S ribosomal subunit. Contacts protein L32 By similarity.
Sequence similarities	Belongs to the ribosomal protein L17P family.

Ontologies

Keywords
Molecular function	Ribonucleoprotein Ribosomal protein
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	translation Inferred from electronic annotation. Source: HAMAP
Cellular_component	ribosome Inferred from electronic annotation. Source: UniProtKB-KW
Molecular_function	structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 116	116	50S ribosomal protein L17 HAMAP-Rule MF_01368		PRO_1000055975

Sequences

	Sequence		Length	Mass (Da)
	A5GIS1 [UniParc]. Last modified June 12, 2007. Version 1. Checksum: 45346498117C9FB8	FASTA	116	13,367
	10 20 30 40 50 60 MRHQCRVPQL GRPADQRKAM LRGLTTQLIR EGRVTTTKAR AKALRDEAER MITLAKEGSL 70 80 90 100 110 ASRRRVLGYV YDKQLVHALF EKAPDRYSDR KGGYTRITRT VRRRGDNAEM AIIELV

References

[1]	Genoscope Submitted (MAY-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: WH7803.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CT971583 Genomic DNA. Translation: CAK22836.1.
RefSeq	YP_001224133.1. NC_009481.1.
3D structure databases
ProteinModelPortal	A5GIS1.
SMR	A5GIS1. Positions 1-116.
ModBase	Search...
Protein-protein interaction databases
STRING	32051.SynWH7803_0410.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	CAK22836; CAK22836; SynWH7803_0410.
GeneID	5147828.
KEGG	syx:SynWH7803_0410.
PATRIC	23826876. VBISynSp43824_0415.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0203.
HOGENOM	HOG000019780.
KO	K02879.
OMA	CRVPQLG.
ProtClustDB	PRK05591.
Family and domain databases
Gene3D	3.90.1030.10. 1 hit.
HAMAP	MF_01368. Ribosomal_L17.
InterPro	IPR000456. Ribosomal_L17. [Graphical view]
PANTHER	PTHR14413. PTHR14413. 1 hit.
Pfam	PF01196. Ribosomal_L17. 1 hit. [Graphical view]
SUPFAM	SSF64263. Ribosomal_L17. 1 hit.
TIGRFAMs	TIGR00059. L17. 1 hit.
PROSITE	PS01167. RIBOSOMAL_L17. False negative. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

RL17_SYNPW

Accession

Primary (citable) accession number: A5GIS1

Entry history

Integrated into UniProtKB/Swiss-Prot:	January 15, 2008
Last sequence update:	June 12, 2007
Last modified:	May 1, 2013
This is version 35 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program