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Protein

Protein RTF2 homolog

Gene

RTFDC1

Organism
Sus scrofa (Pig)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Recommended name:
Protein RTF2 homolog
Alternative name(s):
Replication termination factor 2 domain-containing protein 1
Gene namesi
Name:RTFDC1
OrganismiSus scrofa (Pig)
Taxonomic identifieri9823 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaCetartiodactylaSuinaSuidaeSus
Proteomesi
  • UP000008227 Componenti: Chromosome 17

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00003272371 – 306Protein RTF2 homologAdd BLAST306

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei287PhosphoserineBy similarity1

Keywords - PTMi

Phosphoprotein

Proteomic databases

PaxDbiA5GFW7
PeptideAtlasiA5GFW7
PRIDEiA5GFW7

Expressioni

Gene expression databases

BgeeiENSSSCG00000007496
GenevisibleiA5GFW7 SS

Interactioni

Protein-protein interaction databases

STRINGi9823.ENSSSCP00000030380

Structurei

3D structure databases

SMRiA5GFW7
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the rtf2 family.Curated

Phylogenomic databases

eggNOGiKOG3113 Eukaryota
ENOG41113CN LUCA
GeneTreeiENSGT00390000010923
HOGENOMiHOG000230885
HOVERGENiHBG051164
InParanoidiA5GFW7
OMAiPCGHVFA
OrthoDBiEOG091G0OWI
TreeFamiTF314621

Family and domain databases

InterProiView protein in InterPro
IPR006735 Rtf2
IPR027799 Rtf2_RING-finger
PANTHERiPTHR12775 PTHR12775, 1 hit
PfamiView protein in Pfam
PF04641 Rtf2, 1 hit

Sequencei

Sequence statusi: Complete.

A5GFW7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGCDGGTIPK RHELVKGPKK VEKVDKDAEL VAQWNYCTLS QEILRRPIVA
60 70 80 90 100
CELGRLYNKD AVIEFLLDKS SEKALGKAAS HIKSIKNVTE LRLSDNPAWE
110 120 130 140 150
GDKGSTKGDK HDDLQRARFI CPVVGLEMNG RHRFCYLRCC GCVFSERALK
160 170 180 190 200
EIKAEVCHTC GAAFQEDDVI VLNGTKEDVA MLQTRMEERR LRAKLGKKTK
210 220 230 240 250
KPKAAESVSK SDISEEAPGP SKMKAGKPEE TSLDSREKKT SSAPRSAAAH
260 270 280 290 300
GSSSGKAGKP VCGAPKRSIA DSGESEAYKS LFTTHSSAKR SKEESAHWVT

HTSYCF
Length:306
Mass (Da):33,601
Last modified:June 12, 2007 - v1
Checksum:i4F3D6901733991C7
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Sequence conflicti247Missing in CAN13140 (Ref. 1) Curated1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CR956640 Genomic DNA Translation: CAN13140.1
CR956640 Genomic DNA Translation: CAN13141.1
RefSeqiNP_001103902.1, NM_001110432.1
XP_005673089.1, XM_005673032.2
UniGeneiSsc.15421

Genome annotation databases

EnsembliENSSSCT00000008206; ENSSSCP00000007988; ENSSSCG00000007496
GeneIDi100126294
KEGGissc:100126294

Similar proteinsi

Entry informationi

Entry nameiRTF2_PIG
AccessioniPrimary (citable) accession number: A5GFW7
Secondary accession number(s): A5GFW6
Entry historyiIntegrated into UniProtKB/Swiss-Prot: April 8, 2008
Last sequence update: June 12, 2007
Last modified: April 25, 2018
This is version 53 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome
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Main funding by: National Institutes of Health