Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

A5GBJ2 (A5GBJ2_GEOUR) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 54. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Protein attributes

Sequence length679 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate By similarity. RuleBase RU004996

Catalytic activity

Sedoheptulose 7-phosphate + D-glyceraldehyde 3-phosphate = D-ribose 5-phosphate + D-xylulose 5-phosphate. RuleBase RU004996

Cofactor

Binds 1 magnesium ion per subunit. Can also utilize other divalent metal cations, such as Ca2+, Mn2+ and Co2+ By similarity. RuleBase RU004996

Binds 1 thiamine pyrophosphate per subunit By similarity. RuleBase RU004996

Subunit structure

Homodimer By similarity. RuleBase RU004996

Sequence similarities

Belongs to the transketolase family. RuleBase RU004996

Sequences

Sequence LengthMass (Da)Tools
A5GBJ2 [UniParc].

Last modified June 12, 2007. Version 1.
Checksum: 3B858B20146FCF83

FASTA67973,286
        10         20         30         40         50         60 
MAKGSLTERE ARLGANTLRM LAVDAVERAN SGHPGLPMGG ADYAFLLWHN YLVFNPVDPR 

        70         80         90        100        110        120 
WPNRDRFILS AGHGCMLLYG LLHLFGFALS LDDLKNFRQW GSRTPGHPEY GHTPGVEVTT 

       130        140        150        160        170        180 
GPLGQGFADG VGMALAARMA AERFNDAIFS PIDHHIYAIV SDGDLMEGIS SEAASLAGHL 

       190        200        210        220        230        240 
KLGNIIYIYD DNGITIEGKT ELAFSENAGK RFAAYGWHVQ RIDGHDFDQI DTAIGAAQSE 

       250        260        270        280        290        300 
KDRPSLIIAR THIAQGSPNK HDSAVAHGSP LGAEEVAATR RNLHWPEELF YVPAEVRALC 

       310        320        330        340        350        360 
EKRKADMLSV HREWERNLAL WRRRNPDKSR LWDEMWQRKL PTDLADSLLQ AVGGAEGATR 

       370        380        390        400        410        420 
SLSGRIIQEA AALVPALAGG SADLEPSTNT GIKASQSVSA GAFGGRNIHF GVREHAMAAM 

       430        440        450        460        470        480 
LNGMALYGCF VPFGATFLVF SDYCRPAIRL SALMGAQVIH VFTHDSVLLG EDGPTHQPVE 

       490        500        510        520        530        540 
HLSSLRLIPN LTVIRPADGV ETALAWTAAL TRKTGPTALV LSRQKLPVLA REGTFAPTLV 

       550        560        570        580        590        600 
LRGGYVLVSG GDKPDVIIMA SGSEVSLAVA AGKLLAEQGI NARIVSVPCL EAFSAQPQTY 

       610        620        630        640        650        660 
RRSVLGGRAP RVAVEAGPGA LWWRLLGAGG LFIGVESFGA SASEKVLAEQ FGLTPQQVAE 

       670 
RIGEYVSRKQ KRKNFLRTK 

« Hide

References

[1]"Complete sequence of Geobacter uraniireducens Rf4."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chertkov O., Brettin T., Bruce D., Han C., Schmutz J., Larimer F., Land M. expand/collapse author list , Hauser L., Kyrpides N., Mikhailova N., Shelobolina E., Aklujkar M., Lovley D., Richardson P.
Submitted (MAY-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Rf4 EMBL ABQ25049.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000698 Genomic DNA. Translation: ABQ25049.1.
RefSeqYP_001229622.1. NC_009483.1.

3D structure databases

ProteinModelPortalA5GBJ2.
SMRA5GBJ2. Positions 12-666.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING351605.Gura_0841.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABQ25049; ABQ25049; Gura_0841.
GeneID5164502.
KEGGgur:Gura_0841.
PATRIC22031604. VBIGeoUra13052_0895.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0021.
HOGENOMHOG000225954.
KOK00615.
OMAHINNIML.
OrthoDBEOG6N3CRG.

Enzyme and pathway databases

BioCycGURA351605:GI6A-850-MONOMER.

Family and domain databases

Gene3D3.40.50.920. 1 hit.
3.40.50.970. 2 hits.
InterProIPR029061. THDP-binding.
IPR009014. Transketo_C/Pyr-ferredox_oxred.
IPR005475. Transketolase-like_Pyr-bd.
IPR005478. Transketolase_bac-like.
IPR020826. Transketolase_BS.
IPR005476. Transketolase_C.
IPR005474. Transketolase_N.
[Graphical view]
PfamPF02779. Transket_pyr. 1 hit.
PF02780. Transketolase_C. 1 hit.
PF00456. Transketolase_N. 1 hit.
[Graphical view]
SMARTSM00861. Transket_pyr. 1 hit.
[Graphical view]
SUPFAMSSF52518. SSF52518. 2 hits.
SSF52922. SSF52922. 1 hit.
TIGRFAMsTIGR00232. tktlase_bact. 1 hit.
PROSITEPS00801. TRANSKETOLASE_1. 1 hit.
PS00802. TRANSKETOLASE_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA5GBJ2_GEOUR
AccessionPrimary (citable) accession number: A5GBJ2
Entry history
Integrated into UniProtKB/TrEMBL: June 12, 2007
Last sequence update: June 12, 2007
Last modified: June 11, 2014
This is version 54 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)