A5G8N6 (A5G8N6_GEOUR) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Lytic transglycosylase, catalytic EMBL ABQ28154.1

Gene names

Ordered Locus Names:

Gura_4010

Organism

Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens) [Complete proteome] [HAMAP]

Taxonomic identifier

351605 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Deltaproteobacteria › Desulfuromonadales › Geobacteraceae › Geobacter

Protein attributes

Sequence length	507 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Predicted

Ontologies

Keywords
Domain	Signal EMBL ABQ28154.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	cell wall macromolecule catabolic process Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 20	20	Potential EMBL ABQ28154.1
	Chain	21 – 507	487	Potential EMBL ABQ28154.1		PRO_5000245459

Sequences

	Sequence		Length	Mass (Da)
	A5G8N6 [UniParc]. Last modified June 12, 2007. Version 1. Checksum: 90331D4528AE154F	FASTA	507	57,102
	10 20 30 40 50 60 MNKILLMLVM LLPAPSAFAV DQPFLQQEAM AHEANLSLSD PAKLIGKTEQ SRSRLASSTS 70 80 90 100 110 120 EGHLLQALEL PPSEIFSLEE ALAKQVETDF DLKLPEEELP ESDIPLTFNS KVEYFTHYFQ 130 140 150 160 170 180 TSGRKAFSKW LSRSERFIPM MREVLKKEGL PEDLVYLAMI ESGFSPHAYS VASAVGPWQF 190 200 210 220 230 240 MSATGKRYSL RIDSWIDERR DPLKSTVAAA LYLKELYAMF NNDWYLAAAG YNAGENKILR 250 260 270 280 290 300 AINMYNSRDF WQLSKGAYLK RETKDYVPKL LAAAIIAKEP AKYGFADVAY LPPVEFDTVT 310 320 330 340 350 360 IPSRTDLEVV AKICEIPYQA VRDLNPELRR WCTPPDYPGY QLKIPRGKKA AFEAEYAKIP 370 380 390 400 410 420 EDKRYTEKIQ YARYRAKKRD TLASVAKRFG TTSQVLAELN SLGKVKRLRG KVLIVPVQIA 430 440 450 460 470 480 ALEGPSEKGA PRPSHAGSDS KSFNKYYTVK KGDTLAALAK RFNVSARILS LWNNIKTRVA 490 500 LRPGKRIIVA KYVEKKGVMT NAAEDNG

References

[1]

"Complete sequence of Geobacter uraniireducens Rf4." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chertkov O., Brettin T., Bruce D., Han C., Schmutz J., Larimer F., Land M. , Hauser L., Kyrpides N., Mikhailova N., Shelobolina E., Aklujkar M., Lovley D., Richardson P. Submitted (MAY-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Rf4.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000698 Genomic DNA. Translation: ABQ28154.1.
RefSeq	YP_001232727.1. NC_009483.1.
3D structure databases
ProteinModelPortal	A5G8N6.
ModBase	Search...
Protein-protein interaction databases
STRING	A5G8N6.
Protein family/group databases
CAZy	GH23. Glycoside Hydrolase Family 23.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5166955.
GenomeReviews	Gene locus Gura_4010 in contig CP000698_GR.
KEGG	gur:Gura_4010.
PATRIC	22038457. VBIGeoUra13052_4275.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0741.
HOGENOM	HBG359010.
OMA	KQNWWYD.
ProtClustDB	CLSK828136.
Family and domain databases
InterPro	IPR023346. Lysozyme-like_dom. IPR008258. Lytic_TGlycosylase-like_cat. IPR018392. Peptidoglycan-bd_lysin. IPR002482. Peptidoglycan-bd_Lysin_subgr. [Graphical view]
KO	K08307.
Pfam	PF01476. LysM. 2 hits. PF01464. SLT. 1 hit. [Graphical view]
SMART	SM00257. LysM. 2 hits. [Graphical view]
SUPFAM	SSF53955. SSF53955. 1 hit.
ProtoNet	Search...

Entry information

Entry name

A5G8N6_GEOUR

Accession

Primary (citable) accession number: A5G8N6

Entry history

Integrated into UniProtKB/TrEMBL:	June 12, 2007
Last sequence update:	June 12, 2007
Last modified:	December 14, 2011
This is version 30 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)