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A5G882 (A5G882_GEOUR) Unreviewed, UniProtKB/TrEMBL

Last modified May 29, 2013. Version 53. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length384 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids By similarity. HAMAP-Rule MF_01201

Catalytic activity

L-alanine = D-alanine. HAMAP-Rule MF_01201 RuleBase RU000608 SAAS SAAS020622

Cofactor

Pyridoxal phosphate By similarity. HAMAP-Rule MF_01201 RuleBase RU000608 SAAS SAAS020622

Pathway

Amino-acid biosynthesis; D-alanine biosynthesis; D-alanine from L-alanine: step 1/1. HAMAP-Rule MF_01201 SAAS SAAS020622

Sequence similarities

Belongs to the alanine racemase family. HAMAP-Rule MF_01201 RuleBase RU004188

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site451Proton acceptor; specific for D-alanine By similarity HAMAP-Rule MF_01201
Active site2751Proton acceptor; specific for L-alanine By similarity HAMAP-Rule MF_01201
Binding site1431Substrate By similarity HAMAP-Rule MF_01201
Binding site3231Substrate; via amide nitrogen By similarity HAMAP-Rule MF_01201

Amino acid modifications

Modified residue451N6-(pyridoxal phosphate)lysine By similarity HAMAP-Rule MF_01201

Sequences

Sequence LengthMass (Da)Tools
A5G882 [UniParc].

Last modified June 12, 2007. Version 1.
Checksum: B86560FE305BFBD2

FASTA38441,874
        10         20         30         40         50         60 
MERLNVLNLD SRPTIAEIDL AALRHNYYQV KKAVPAGSGL LAVVKADAYG HGFMDISREL 

        70         80         90        100        110        120 
EALGVTAFGV AFLAEGIQLR KSGIDRPILL LGGIYPGQEK KCVGFNISTA VFSLDQARVL 

       130        140        150        160        170        180 
DDVARKLYRK AKIHLKVDTG MGRLGIRYEE APAFFRELKK LKNLELEGIF SHFASADELD 

       190        200        210        220        230        240 
DEGSGYTARQ TEIFAAVLQE GTRQGFSPTF VHIANSAAAF SRDFPFCNLA RPGIVLYGAL 

       250        260        270        280        290        300 
PSADFQGKID VKPVMRLKSR VAMLKWVEPG TSISYARRYV AGKKTLVASV PVGYADGYCR 

       310        320        330        340        350        360 
ALTNKGEALV RGQRARVAGT VCMDWIMLDV TDIAGVAVGD EVTLLGCDNQ GNCIHAEELA 

       370        380 
AWSGTIAYEI FCGISKRVPR VYIP

« Hide

References

[1]"Complete sequence of Geobacter uraniireducens Rf4."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chertkov O., Brettin T., Bruce D., Han C., Schmutz J., Larimer F., Land M. expand/collapse author list , Hauser L., Kyrpides N., Mikhailova N., Shelobolina E., Aklujkar M., Lovley D., Richardson P.
Submitted (MAY-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Rf4.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000698 Genomic DNA. Translation: ABQ28000.1.
RefSeqYP_001232573.1. NC_009483.1.

3D structure databases

ProteinModelPortalA5G882.
ModBaseSearch...

Protein-protein interaction databases

STRING351605.Gura_3850.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABQ28000; ABQ28000; Gura_3850.
GeneID5166061.
KEGGgur:Gura_3850.
PATRIC22038119. VBIGeoUra13052_4108.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0787.
HOGENOMHOG000031444.
KOK01775.
OMAPRIPRRY.
ProtClustDBCLSK827943.

Enzyme and pathway databases

BioCycGURA351605:GI6A-3902-MONOMER.
UniPathwayUPA00042; UER00497.

Family and domain databases

Gene3D2.40.37.10. 1 hit.
HAMAPMF_01201. Ala_racemase.
InterProIPR000821. Ala_racemase.
IPR009006. Ala_racemase/Decarboxylase_C.
IPR011079. Ala_racemase_C.
IPR001608. Ala_racemase_N.
IPR020622. Ala_racemase_pyridoxalP-BS.
[Graphical view]
PfamPF00842. Ala_racemase_C. 1 hit.
PF01168. Ala_racemase_N. 1 hit.
[Graphical view]
PRINTSPR00992. ALARACEMASE.
SMARTSM01005. Ala_racemase_C. 1 hit.
[Graphical view]
SUPFAMSSF50621. Racem_decarbox_C. 1 hit.
TIGRFAMsTIGR00492. alr. 1 hit.
PROSITEPS00395. ALANINE_RACEMASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA5G882_GEOUR
AccessionPrimary (citable) accession number: A5G882
Entry history
Integrated into UniProtKB/TrEMBL: June 12, 2007
Last sequence update: June 12, 2007
Last modified: May 29, 2013
This is version 53 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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