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A5G740 (A5G740_GEOUR) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 44. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length534 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Sequences

Sequence LengthMass (Da)Tools
A5G740 [UniParc].

Last modified June 12, 2007. Version 1.
Checksum: 9AAD38E13BD27388

FASTA53460,785
        10         20         30         40         50         60 
MGLKEYASKR RFEKTPEPKP DVPHEGRRLV FVVHKHAARA LHYDLRLELE GVLKSWAVPK 

        70         80         90        100        110        120 
GPSLDPSVKR LAVMVEDHPL DYRDFEGVIP EGNYGAGSVI IWDRGFYRHP SAGDENENEK 

       130        140        150        160        170        180 
LLLDGLRKGD MKFVLEGEKL RGEFALVRMG KDGKSWLLLK KKDRYASKGE ILQENRSVVS 

       190        200        210        220        230        240 
HKTLEEMLEA GGQKSFKQKK INQIRLHEAK ESEELHDAPV KPMPHNIKPM LATLAREPFD 

       250        260        270        280        290        300 
HPDWVFEVKW DGYRAIAEMR DGDVALYSRN LLSLQQKFSP IADALRECRF DAVLDGEIVV 

       310        320        330        340        350        360 
VDDRGHPDFQ LLQNYQKSGN GHLLYYVFDL LYFQGHDLTG LPLLRRKEIL KKILPSAPKI 

       370        380        390        400        410        420 
KYSDHVWKDG VLFFTVVREK GLEGIIAKHA QSAYQMGIRS RQWLKVKTRL TQEGVIAGFT 

       430        440        450        460        470        480 
EPRGGRKCFG TLVLGVFQGD ELIYIGHSGG GFGAKDLQEI RAKLEPLIRK ECPFKVRPET 

       490        500        510        520        530 
NTPATWVKPE LVCEISLSGW TEDAVMRHPV FLRLREDKTA REVVRDSGGE GGNL 

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References

[1]"Complete sequence of Geobacter uraniireducens Rf4."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chertkov O., Brettin T., Bruce D., Han C., Schmutz J., Larimer F., Land M. expand/collapse author list , Hauser L., Kyrpides N., Mikhailova N., Shelobolina E., Aklujkar M., Lovley D., Richardson P.
Submitted (MAY-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Rf4 EMBL ABQ27608.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000698 Genomic DNA. Translation: ABQ27608.1.
RefSeqYP_001232181.1. NC_009483.1.

3D structure databases

ProteinModelPortalA5G740.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING351605.Gura_3452.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABQ27608; ABQ27608; Gura_3452.
GeneID5162916.
KEGGgur:Gura_3452.
PATRIC22037278. VBIGeoUra13052_3689.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1793.
HOGENOMHOG000222509.
KOK01971.
OMAMVHRMDP.
OrthoDBEOG661H49.

Enzyme and pathway databases

BioCycGURA351605:GI6A-3502-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR014144. LigD_PE_domain.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR02777. LigD_PE_dom. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
PROSITEPS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA5G740_GEOUR
AccessionPrimary (citable) accession number: A5G740
Entry history
Integrated into UniProtKB/TrEMBL: June 12, 2007
Last sequence update: June 12, 2007
Last modified: November 13, 2013
This is version 44 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)