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A5G740

- A5G740_GEOUR

UniProt

A5G740 - A5G740_GEOUR

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Protein
Submitted name:

ATP dependent DNA ligase

Gene
Gura_3452
Organism
Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciGURA351605:GI6A-3502-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:Gura_3452Imported
OrganismiGeobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens)Imported
Taxonomic identifieri351605 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaDesulfuromonadalesGeobacteraceaeGeobacter
ProteomesiUP000006695: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi351605.Gura_3452.

Structurei

3D structure databases

ProteinModelPortaliA5G740.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1793.
HOGENOMiHOG000222509.
KOiK01971.
OMAiMVHRMDP.
OrthoDBiEOG661H49.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR014144. LigD_PE_domain.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR02777. LigD_PE_dom. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
PROSITEiPS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A5G740-1 [UniParc]FASTAAdd to Basket

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MGLKEYASKR RFEKTPEPKP DVPHEGRRLV FVVHKHAARA LHYDLRLELE    50
GVLKSWAVPK GPSLDPSVKR LAVMVEDHPL DYRDFEGVIP EGNYGAGSVI 100
IWDRGFYRHP SAGDENENEK LLLDGLRKGD MKFVLEGEKL RGEFALVRMG 150
KDGKSWLLLK KKDRYASKGE ILQENRSVVS HKTLEEMLEA GGQKSFKQKK 200
INQIRLHEAK ESEELHDAPV KPMPHNIKPM LATLAREPFD HPDWVFEVKW 250
DGYRAIAEMR DGDVALYSRN LLSLQQKFSP IADALRECRF DAVLDGEIVV 300
VDDRGHPDFQ LLQNYQKSGN GHLLYYVFDL LYFQGHDLTG LPLLRRKEIL 350
KKILPSAPKI KYSDHVWKDG VLFFTVVREK GLEGIIAKHA QSAYQMGIRS 400
RQWLKVKTRL TQEGVIAGFT EPRGGRKCFG TLVLGVFQGD ELIYIGHSGG 450
GFGAKDLQEI RAKLEPLIRK ECPFKVRPET NTPATWVKPE LVCEISLSGW 500
TEDAVMRHPV FLRLREDKTA REVVRDSGGE GGNL 534
Length:534
Mass (Da):60,785
Last modified:June 12, 2007 - v1
Checksum:i9AAD38E13BD27388
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000698 Genomic DNA. Translation: ABQ27608.1.
RefSeqiYP_001232181.1. NC_009483.1.

Genome annotation databases

EnsemblBacteriaiABQ27608; ABQ27608; Gura_3452.
GeneIDi5162916.
KEGGigur:Gura_3452.
PATRICi22037278. VBIGeoUra13052_3689.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000698 Genomic DNA. Translation: ABQ27608.1 .
RefSeqi YP_001232181.1. NC_009483.1.

3D structure databases

ProteinModelPortali A5G740.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 351605.Gura_3452.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABQ27608 ; ABQ27608 ; Gura_3452 .
GeneIDi 5162916.
KEGGi gur:Gura_3452.
PATRICi 22037278. VBIGeoUra13052_3689.

Phylogenomic databases

eggNOGi COG1793.
HOGENOMi HOG000222509.
KOi K01971.
OMAi MVHRMDP.
OrthoDBi EOG661H49.

Enzyme and pathway databases

BioCyci GURA351605:GI6A-3502-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR014144. LigD_PE_domain.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR02777. LigD_PE_dom. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
PROSITEi PS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Rf4Imported.

Entry informationi

Entry nameiA5G740_GEOUR
AccessioniPrimary (citable) accession number: A5G740
Entry historyi
Integrated into UniProtKB/TrEMBL: June 12, 2007
Last sequence update: June 12, 2007
Last modified: November 13, 2013
This is version 44 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3