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A5FYY5

- A5FYY5_ACICJ

UniProt

A5FYY5 - A5FYY5_ACICJ

Protein
Submitted name:

ATP dependent DNA ligase

Gene

Acry_1611

Organism
Acidiphilium cryptum (strain JF-5)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 48 (01 Oct 2014)
      Sequence version 1 (12 Jun 2007)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA ligation involved in DNA repair Source: InterPro
    2. DNA recombination Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciACRY349163:GHET-1634-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    ATP dependent DNA ligaseImported
    Gene namesi
    Ordered Locus Names:Acry_1611Imported
    OrganismiAcidiphilium cryptum (strain JF-5)Imported
    Taxonomic identifieri349163 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhodospirillalesAcetobacteraceaeAcidiphilium
    ProteomesiUP000000245: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi349163.Acry_1611.

    Structurei

    3D structure databases

    ProteinModelPortaliA5FYY5.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG1793.
    HOGENOMiHOG000036007.
    KOiK01971.
    OMAiRVWLWSR.
    OrthoDBiEOG6Q8HXT.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
    PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    A5FYY5-1 [UniParc]FASTAAdd to Basket

    « Hide

    MKPFADLLER LLYTTGRNAK IALLADYFAH RPDPERGYAL AAIAGALDFP    50
    GAKPAVLREL AAARTDPELF ALSYDFVGDL AETIALLWPP AARPAPPGLP 100
    DLVAALRAAP RAEIPALIEG WLDASDVSTR IALIKLITGG LRVGASLRLA 150
    KLALARQFAV EADEIEEVWH GLEAPYTALF DWLEGRAPRP APGAAPVFRP 200
    PMLAHPIEAA DLATLDWSAH RAEWKWDGIR VQLVSTPGGS RLYSRGAEDI 250
    SAAFPEIVAA MDFHAVLDGE LLVIRDGAVA PFADLQQRLN RKSVPAKLRA 300
    ANPVGVRLYD MLFEGETDLR GLPFDARRAR LEAWFARTAP ARMDLSELIP 350
    FAAAEDLAAL RAGARDAAIE GLMLKRADSP YLAGRPKGHW WKWKRDPLSL 400
    DCVLMYAQRG HGKRSSYYSD YTFGVWTAEG ALVPVGKAYS GYTDAELQRL 450
    DRWIRAHTVA SYGPVREVEK AIVLEVGFDA AQRSTRHKSG IALRFPRILR 500
    IREDKPAAEA DTLETARLLL PG 522
    Length:522
    Mass (Da):57,219
    Last modified:June 12, 2007 - v1
    Checksum:i4787A198BB118ADE
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000697 Genomic DNA. Translation: ABQ30817.1.
    RefSeqiWP_011942368.1. NC_009484.1.
    YP_001234736.1. NC_009484.1.

    Genome annotation databases

    EnsemblBacteriaiABQ30817; ABQ30817; Acry_1611.
    GeneIDi5161964.
    KEGGiacr:Acry_1611.
    PATRICi20648252. VBIAciCry6074_2110.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000697 Genomic DNA. Translation: ABQ30817.1 .
    RefSeqi WP_011942368.1. NC_009484.1.
    YP_001234736.1. NC_009484.1.

    3D structure databases

    ProteinModelPortali A5FYY5.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 349163.Acry_1611.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABQ30817 ; ABQ30817 ; Acry_1611 .
    GeneIDi 5161964.
    KEGGi acr:Acry_1611.
    PATRICi 20648252. VBIAciCry6074_2110.

    Phylogenomic databases

    eggNOGi COG1793.
    HOGENOMi HOG000036007.
    KOi K01971.
    OMAi RVWLWSR.
    OrthoDBi EOG6Q8HXT.

    Enzyme and pathway databases

    BioCyci ACRY349163:GHET-1634-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR026333. ATP_dep_DNA_lig_pp_1105_fam.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    TIGRFAMsi TIGR04120. DNA_lig_bact. 1 hit.
    PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: JF-5Imported.

    Entry informationi

    Entry nameiA5FYY5_ACICJ
    AccessioniPrimary (citable) accession number: A5FYY5
    Entry historyi
    Integrated into UniProtKB/TrEMBL: June 12, 2007
    Last sequence update: June 12, 2007
    Last modified: October 1, 2014
    This is version 48 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3