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Protein
Submitted name:

ATP dependent DNA ligase

Gene

Acry_1611

Organism
Acidiphilium cryptum (strain JF-5)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciACRY349163:GHET-1634-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:Acry_1611Imported
OrganismiAcidiphilium cryptum (strain JF-5)Imported
Taxonomic identifieri349163 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhodospirillalesAcetobacteraceaeAcidiphilium
ProteomesiUP000000245 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi349163.Acry_1611.

Structurei

3D structure databases

ProteinModelPortaliA5FYY5.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1793.
HOGENOMiHOG000036007.
KOiK10747.
OMAiGQPYPFF.
OrthoDBiEOG6Q8HXT.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A5FYY5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKPFADLLER LLYTTGRNAK IALLADYFAH RPDPERGYAL AAIAGALDFP
60 70 80 90 100
GAKPAVLREL AAARTDPELF ALSYDFVGDL AETIALLWPP AARPAPPGLP
110 120 130 140 150
DLVAALRAAP RAEIPALIEG WLDASDVSTR IALIKLITGG LRVGASLRLA
160 170 180 190 200
KLALARQFAV EADEIEEVWH GLEAPYTALF DWLEGRAPRP APGAAPVFRP
210 220 230 240 250
PMLAHPIEAA DLATLDWSAH RAEWKWDGIR VQLVSTPGGS RLYSRGAEDI
260 270 280 290 300
SAAFPEIVAA MDFHAVLDGE LLVIRDGAVA PFADLQQRLN RKSVPAKLRA
310 320 330 340 350
ANPVGVRLYD MLFEGETDLR GLPFDARRAR LEAWFARTAP ARMDLSELIP
360 370 380 390 400
FAAAEDLAAL RAGARDAAIE GLMLKRADSP YLAGRPKGHW WKWKRDPLSL
410 420 430 440 450
DCVLMYAQRG HGKRSSYYSD YTFGVWTAEG ALVPVGKAYS GYTDAELQRL
460 470 480 490 500
DRWIRAHTVA SYGPVREVEK AIVLEVGFDA AQRSTRHKSG IALRFPRILR
510 520
IREDKPAAEA DTLETARLLL PG
Length:522
Mass (Da):57,219
Last modified:June 12, 2007 - v1
Checksum:i4787A198BB118ADE
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000697 Genomic DNA. Translation: ABQ30817.1.
RefSeqiWP_011942368.1. NC_009484.1.
YP_001234736.1. NC_009484.1.

Genome annotation databases

EnsemblBacteriaiABQ30817; ABQ30817; Acry_1611.
KEGGiacr:Acry_1611.
PATRICi20648252. VBIAciCry6074_2110.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000697 Genomic DNA. Translation: ABQ30817.1.
RefSeqiWP_011942368.1. NC_009484.1.
YP_001234736.1. NC_009484.1.

3D structure databases

ProteinModelPortaliA5FYY5.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi349163.Acry_1611.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABQ30817; ABQ30817; Acry_1611.
KEGGiacr:Acry_1611.
PATRICi20648252. VBIAciCry6074_2110.

Phylogenomic databases

eggNOGiCOG1793.
HOGENOMiHOG000036007.
KOiK10747.
OMAiGQPYPFF.
OrthoDBiEOG6Q8HXT.

Enzyme and pathway databases

BioCyciACRY349163:GHET-1634-MONOMER.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: JF-5Imported.

Entry informationi

Entry nameiA5FYY5_ACICJ
AccessioniPrimary (citable) accession number: A5FYY5
Entry historyi
Integrated into UniProtKB/TrEMBL: June 12, 2007
Last sequence update: June 12, 2007
Last modified: May 27, 2015
This is version 55 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.