Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

A5FXF1 (A5FXF1_ACICJ) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 45. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
EC=4.1.1.39 EMBL ABQ30283.1
Gene names
Ordered Locus Names:Acry_1067 EMBL ABQ30283.1
OrganismAcidiphilium cryptum (strain JF-5) [Complete proteome] [HAMAP] EMBL ABQ30283.1
Taxonomic identifier349163 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhodospirillalesAcetobacteraceaeAcidiphilium

Protein attributes

Sequence length421 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the RuBisCO large chain family. RuleBase RU004228

Ontologies

Keywords
   Molecular functionLyase EMBL ABQ30283.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarbon fixation

Inferred from electronic annotation. Source: InterPro

   Molecular_functionmagnesium ion binding

Inferred from electronic annotation. Source: InterPro

ribulose-bisphosphate carboxylase activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
A5FXF1 [UniParc].

Last modified June 12, 2007. Version 1.
Checksum: 509468BD4DB795AE

FASTA42143,942
        10         20         30         40         50         60 
MSGAERIEAD YLIETAFDPG HAAAAMAGEQ SSGTFVPVPG ETPELKARAA ARVERLDVLE 

        70         80         90        100        110        120 
TVGSPSLPGA GTPRGASPPV IRRAAVTLSW PVDNLGPSLP NLVATVAGNL FELRQFSGLR 

       130        140        150        160        170        180 
LLDLRLPASF AAANPGVRFG IPGTRRLAGV EGRPLIGTIV KPSVGFDAGQ TAALVATLCE 

       190        200        210        220        230        240 
AGIDFIKDDE LQADGPACPF EARARAVMRV VNDHAERTGK KVMFAFNLTG EVDEMRRRHD 

       250        260        270        280        290        300 
LVRELGGTCV MASLNSVGVS GFLALSRHAA LPVHAHRNGW GALSRHPLLG WSYVAWQKIW 

       310        320        330        340        350        360 
RLAGADHMHV NGLRNKFSED DDSVIASARA CLTPMSDAAP NVVMPVFSSG QSVRQAGDTY 

       370        380        390        400        410        420 
AALGSADLIY AAGGGIMGHP GGPAEGVAAL RAAWDAAMAG IPADEHAKTH PALARALEGA 


S 

« Hide

References

[1]"Complete sequence of chromosome of Acidiphilium cryptum JF-5."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Sims D., Brettin T., Bruce D., Han C., Schmutz J., Larimer F., Land M. expand/collapse author list , Hauser L., Kyrpides N., Kim E., Magnuson T., Richardson P.
Submitted (MAY-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: JF-5 EMBL ABQ30283.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000697 Genomic DNA. Translation: ABQ30283.1.
RefSeqYP_001234202.1. NC_009484.1.

3D structure databases

ProteinModelPortalA5FXF1.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING349163.Acry_1067.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABQ30283; ABQ30283; Acry_1067.
GeneID5161417.
KEGGacr:Acry_1067.
PATRIC20647134. VBIAciCry6074_1559.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1850.
HOGENOMHOG000230831.
KOK01601.
OMADGPACPF.
OrthoDBEOG62K1SK.

Enzyme and pathway databases

BioCycACRY349163:GHET-1084-MONOMER.

Family and domain databases

Gene3D3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
InterProIPR020878. RuBisCo_large_chain_AS.
IPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
[Graphical view]
PfamPF00016. RuBisCO_large. 1 hit.
[Graphical view]
SUPFAMSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
PROSITEPS00157. RUBISCO_LARGE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA5FXF1_ACICJ
AccessionPrimary (citable) accession number: A5FXF1
Entry history
Integrated into UniProtKB/TrEMBL: June 12, 2007
Last sequence update: June 12, 2007
Last modified: May 14, 2014
This is version 45 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)