A5FRW3 (RL15_DEHSB) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
50S ribosomal protein L15

Gene names

Name:	rplO
Ordered Locus Names:	DehaBAV1_0470

Organism

Dehalococcoides sp. (strain BAV1) [Complete proteome] [HAMAP]

Taxonomic identifier

216389 [NCBI]

Taxonomic lineage

Bacteria › Chloroflexi › Dehalococcoidetes › Dehalococcoides

Protein attributes

Sequence length	153 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Binds to the 23S rRNA By similarity. HAMAP MF_01341_B
Subunit structure	Part of the 50S ribosomal subunit By similarity. HAMAP MF_01341_B
Sequence similarities	Belongs to the ribosomal protein L15P family.

Ontologies

Keywords
Ligand	RNA-binding rRNA-binding
Molecular function	Ribonucleoprotein Ribosomal protein
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	translation Inferred from electronic annotation. Source: InterPro
Cellular component	large ribosomal subunit Inferred from electronic annotation. Source: InterPro
Molecular function	rRNA binding Inferred from electronic annotation. Source: UniProtKB-KW structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 153	153	50S ribosomal protein L15 HAMAP MF_01341_B		PRO_1000086710

Sequences

	Sequence		Length	Mass (Da)
	A5FRW3 [UniParc]. Last modified June 12, 2007. Version 1. Checksum: B621F188A3D4A0BE	FASTA	153	16,705
	10 20 30 40 50 60 MRLHELSPAP GSRKDRKRVG RGDAGRGNYS GRGMKGQKAR SGGATRPGFE GGQLPIYLRL 70 80 90 100 110 120 PRKRGFFNPF RIKYAVVNIE QLNMFEAGTE VTPETLLAAG LIRNFVKPVK ILSSGHIDRA 130 140 150 LEVSAHKFSQ AAKAQIEAAG GKVQEIDYAA EIE

References

[1]

"Complete sequence of Dehalococcoides sp. BAV1." US DOE Joint Genome Institute Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Pitluck S., Lowry S., Clum A., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Ritalahti K.M., Loeffler F., Richardson P. Submitted (MAY-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: BAV1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000688 Genomic DNA. Translation: ABQ17055.1.
RefSeq	YP_001213933.1. NC_009455.1.
3D structure databases
ProteinModelPortal	A5FRW3.
ModBase	Search...
Protein-protein interaction databases
STRING	A5FRW3.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5131200.
GenomeReviews	Gene locus DehaBAV1_0470 in contig CP000688_GR.
KEGG	deb:DehaBAV1_0470.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0200.
HOGENOM	HBG727142.
OMA	RKGRGHA.
ProtClustDB	PRK05592.
Enzyme and pathway databases
BioCyc	DSP216389:DEHABAV1_0470-MONOMER.
Family and domain databases
HAMAP	MF_01341_B. Ribosomal_L15_B. [Tree]
InterPro	IPR005749. Ribosomal_L15_bac-type. IPR001196. Ribosomal_L15_CS. IPR021131. Ribosomal_L18e/L15P. [Graphical view]
KO	K02876.
PANTHER	PTHR12934. Ribosom_L15_bac. 1 hit.
Pfam	PF00828. Ribosomal_L18e. 1 hit. [Graphical view]
SUPFAM	SSF52080. Ribosomal_L18e/L15. 1 hit.
TIGRFAMs	TIGR01071. RplO_bact. 1 hit.
PROSITE	PS00475. RIBOSOMAL_L15. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

RL15_DEHSB

Accession

Primary (citable) accession number: A5FRW3

Entry history

Integrated into UniProtKB/Swiss-Prot:	May 20, 2008
Last sequence update:	June 12, 2007
Last modified:	January 25, 2012
This is version 32 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program