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A5FRA5 (A5FRA5_DEHSB) Unreviewed, UniProtKB/TrEMBL

Last modified November 16, 2011. Version 26. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Alanine racemase domain protein EMBL ABQ17269.1
Gene names
Ordered Locus Names:DehaBAV1_0685
OrganismDehalococcoides sp. (strain BAV1) [Complete proteome] [HAMAP]
Taxonomic identifier216389 [NCBI]
Taxonomic lineageBacteria › Chloroflexi › Dehalococcoidetes › Dehalococcoides

Protein attributes

Sequence length220 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

Pyridoxal phosphate By similarity. PIRSR PIRSR004848-1

Sequence similarities

Belongs to the UPF0001 family. RuleBase RU004514

Ontologies

Keywords
   LigandPyridoxal phosphate PIRSR PIRSR004848-1
   Technical termComplete proteome
Gene Ontology (GO)
None. [Check GOA]

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Amino acid modifications

Modified residue271N6-(pyridoxal phosphate)lysine By similarity PIRSR PIRSR004848-1

Sequences

Sequence LengthMass (Da)Tools
A5FRA5 [UniParc].

Last modified June 12, 2007. Version 1.
Checksum: 30FA4C6CB0C0AAF0

FASTA22024,433
        10         20         30         40         50         60 
MYENIAQNVR DILAELPPDV VLVAAVKKRQ PAEILAAIAA GVKIIGHNYL SEAEETYPFI 

        70         80         90        100        110        120 
GDKAEWHFIG KLQSNKCKKI VRLFSVVETV DSFEIASELN RRAAEIDKVM SVFIEINSGR 

       130        140        150        160        170        180 
EKQKSGVLPE ETVELAKRIS GLSNLKLAGL MTMGPALEDP EELRTIFRLT KIKFDEIAVM 

       190        200        210        220 
GLPNTELKFL SMGMSVSYKV AVQEGTNLVR LGTRIFGNRP

« Hide

References

[1]"Complete sequence of Dehalococcoides sp. BAV1."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Pitluck S., Lowry S., Clum A., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Ritalahti K.M., Loeffler F., Richardson P.
Submitted (MAY-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: BAV1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000688 Genomic DNA. Translation: ABQ17269.1.
RefSeqYP_001214147.1. NC_009455.1.

3D structure databases

ProteinModelPortalA5FRA5.
ModBaseSearch...

Protein-protein interaction databases

STRINGA5FRA5.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID5132006.
GenomeReviewsGene locus DehaBAV1_0685 in contig CP000688_GR.
KEGGdeb:DehaBAV1_0685.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0325.
HOGENOMHBG289671.
OMAAVSKTFE.
ProtClustDBCLSK837305.

Family and domain databases

InterProIPR001608. Ala_racemase_N.
IPR011078. UPF0001.
[Graphical view]
KOK06997.
PANTHERPTHR10146. PP_YBL036C. 1 hit.
PfamPF01168. Ala_racemase_N. 1 hit.
[Graphical view]
PIRSFPIRSF004848. YBL036c_PLPDEIII. 1 hit.
TIGRFAMsTIGR00044. TIGR00044. 1 hit.
PROSITEPS01211. UPF0001. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA5FRA5_DEHSB
AccessionPrimary (citable) accession number: A5FRA5
Entry history
Integrated into UniProtKB/TrEMBL: June 12, 2007
Last sequence update: June 12, 2007
Last modified: November 16, 2011
This is version 26 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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