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Protein
Submitted name:

Type II site-specific deoxyribonuclease

Gene

DehaBAV1_0080

Organism
Dehalococcoides mccartyi (strain ATCC BAA-2100 / JCM 16839 / KCTC 5957 / BAV1)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. DNA binding Source: InterPro
  2. Type II site-specific deoxyribonuclease activity Source: UniProtKB-EC

GO - Biological processi

  1. DNA restriction-modification system Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

HydrolaseImported

Enzyme and pathway databases

BioCyciDSP216389:GH6D-83-MONOMER.

Protein family/group databases

REBASEi15244. DspBAVORF79P.

Names & Taxonomyi

Protein namesi
Submitted name:
Type II site-specific deoxyribonucleaseImported (EC:3.1.21.4Imported)
Gene namesi
Ordered Locus Names:DehaBAV1_0080Imported
OrganismiDehalococcoides mccartyi (strain ATCC BAA-2100 / JCM 16839 / KCTC 5957 / BAV1)Imported
Taxonomic identifieri216389 [NCBI]
Taxonomic lineageiBacteriaChloroflexiDehalococcoidiaDehalococcoidalesDehalococcoidaceaeDehalococcoides
ProteomesiUP000002607: Chromosome

Family & Domainsi

Phylogenomic databases

eggNOGiNOG320692.
HOGENOMiHOG000263470.
KOiK01155.
OMAiGMWGIEN.
OrthoDBiEOG6GN72D.

Family and domain databases

InterProiIPR019046. Restrct_endonuc_II_NgoPII.
[Graphical view]
PfamiPF09521. RE_NgoPII. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A5FP47-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MATNILTAIA HLVENPNTQL HQHNKSKTRA NAMGDSLEEY IKDLFANSLN
60 70 80 90 100
ENDVVKKNEI YNQKFCYFGN QNNPPDFIIK NGDAVEVKKI ETMESSLALN
110 120 130 140 150
SSYPKDKLYS TSNMITDACR TCEPWSIKDL LYAIGTVKDG NLKALWMVYG
160 170 180 190 200
DCYAADRSVY ERIQTVISDG VNGIEDIQFS PSKELGRVNK VDPLGITYMR
210 220 230 240 250
IRGMWGIENP NKVFNYIVNI DKNARISVNS IMLKSKYDSF STLDKAKIAS
260 270 280
LANKGLGIKD IRIKSPNNPA NLLDAKLISF RM
Length:282
Mass (Da):31,722
Last modified:June 12, 2007 - v1
Checksum:iFFC897DF9572DFFE
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000688 Genomic DNA. Translation: ABQ16672.1.
RefSeqiWP_011928604.1. NC_009455.1.
YP_001213550.1. NC_009455.1.

Genome annotation databases

EnsemblBacteriaiABQ16672; ABQ16672; DehaBAV1_0080.
GeneIDi5131146.
KEGGideb:DehaBAV1_0080.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000688 Genomic DNA. Translation: ABQ16672.1.
RefSeqiWP_011928604.1. NC_009455.1.
YP_001213550.1. NC_009455.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein family/group databases

REBASEi15244. DspBAVORF79P.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABQ16672; ABQ16672; DehaBAV1_0080.
GeneIDi5131146.
KEGGideb:DehaBAV1_0080.

Phylogenomic databases

eggNOGiNOG320692.
HOGENOMiHOG000263470.
KOiK01155.
OMAiGMWGIEN.
OrthoDBiEOG6GN72D.

Enzyme and pathway databases

BioCyciDSP216389:GH6D-83-MONOMER.

Family and domain databases

InterProiIPR019046. Restrct_endonuc_II_NgoPII.
[Graphical view]
PfamiPF09521. RE_NgoPII. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC BAA-2100 / JCM 16839 / KCTC 5957 / BAV1Imported.

Entry informationi

Entry nameiA5FP47_DEHMB
AccessioniPrimary (citable) accession number: A5FP47
Entry historyi
Integrated into UniProtKB/TrEMBL: June 12, 2007
Last sequence update: June 12, 2007
Last modified: February 4, 2015
This is version 36 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.