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A5FP47 (A5FP47_DEHSB) Unreviewed, UniProtKB/TrEMBL

Last modified May 29, 2013. Version 28. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Type II site-specific deoxyribonuclease EMBL ABQ16672.1
EC=3.1.21.4 EMBL ABQ16672.1
Gene names
Ordered Locus Names:DehaBAV1_0080
OrganismDehalococcoides sp. (strain BAV1) [Complete proteome] [HAMAP] EMBL ABQ16672.1
Taxonomic identifier216389 [NCBI]
Taxonomic lineageBacteria › Chloroflexi › Dehalococcoidia › Dehalococcoidales › Dehalococcoidaceae › Dehalococcoides ›

Protein attributes

Sequence length282 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionHydrolase EMBL ABQ16672.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processDNA restriction-modification system

Inferred from electronic annotation. Source: InterPro

   Molecular_functionDNA binding

Inferred from electronic annotation. Source: InterPro

Type II site-specific deoxyribonuclease activity

Inferred from electronic annotation. Source: EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
A5FP47 [UniParc].

Last modified June 12, 2007. Version 1.
Checksum: FFC897DF9572DFFE

FASTA28231,722
        10         20         30         40         50         60 
MATNILTAIA HLVENPNTQL HQHNKSKTRA NAMGDSLEEY IKDLFANSLN ENDVVKKNEI 

        70         80         90        100        110        120 
YNQKFCYFGN QNNPPDFIIK NGDAVEVKKI ETMESSLALN SSYPKDKLYS TSNMITDACR 

       130        140        150        160        170        180 
TCEPWSIKDL LYAIGTVKDG NLKALWMVYG DCYAADRSVY ERIQTVISDG VNGIEDIQFS 

       190        200        210        220        230        240 
PSKELGRVNK VDPLGITYMR IRGMWGIENP NKVFNYIVNI DKNARISVNS IMLKSKYDSF 

       250        260        270        280 
STLDKAKIAS LANKGLGIKD IRIKSPNNPA NLLDAKLISF RM

« Hide

References

[1]"Complete sequence of Dehalococcoides sp. BAV1."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Pitluck S., Lowry S., Clum A., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Ritalahti K.M., Loeffler F., Richardson P.
Submitted (MAY-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: BAV1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000688 Genomic DNA. Translation: ABQ16672.1.
RefSeqYP_001213550.1. NC_009455.1.

3D structure databases

ModBaseSearch...

Protein family/group databases

REBASE15244. DspBAVORF79P.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABQ16672; ABQ16672; DehaBAV1_0080.
GeneID5131146.
KEGGdeb:DehaBAV1_0080.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGNOG320692.
HOGENOMHOG000263470.
KOK01155.
OMAGMWGIEN.
ProtClustDBCLSK861893.

Enzyme and pathway databases

BioCycDSP216389:GH6D-83-MONOMER.

Family and domain databases

InterProIPR019046. Restrct_endonuc_II_NgoPII.
[Graphical view]
PfamPF09521. RE_NgoPII. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA5FP47_DEHSB
AccessionPrimary (citable) accession number: A5FP47
Entry history
Integrated into UniProtKB/TrEMBL: June 12, 2007
Last sequence update: June 12, 2007
Last modified: May 29, 2013
This is version 28 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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