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A5FME6 (A5FME6_FLAJ1) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 41. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Asparagine--tRNA ligase HAMAP MF_00534
EC=6.1.1.22 HAMAP MF_00534
Alternative name(s):
Asparaginyl-tRNA synthetase HAMAP MF_00534
Gene names
Name:asnC EMBL ABQ03618.1
Synonyms:asnS HAMAP MF_00534
Ordered Locus Names:Fjoh_0583
OrganismFlavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) (Cytophaga johnsonae) [Complete proteome] [HAMAP]
Taxonomic identifier376686 [NCBI]
Taxonomic lineageBacteria › Bacteroidetes › Flavobacteriia › Flavobacteriales › Flavobacteriaceae › Flavobacterium

Protein attributes

Sequence length481 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + L-asparagine + tRNA(Asn) = AMP + diphosphate + L-asparaginyl-tRNA(Asn). HAMAP MF_00534 SAAS SAAS004522

Subunit structure

Homodimer By similarity. HAMAP MF_00534

Subcellular location

Cytoplasm By similarity HAMAP MF_00534.

Sequence similarities

Belongs to the class-II aminoacyl-tRNA synthetase family. HAMAP MF_00534

Sequences

Sequence LengthMass (Da)Tools
A5FME6 [UniParc].

Last modified June 12, 2007. Version 1.
Checksum: E3C9BBF5FCC82772

FASTA48154,958
        10         20         30         40         50         60 
MKHTKVRDLL NSTTTLQEVN AKGWVRTFRN NQFIALNDGS TINNIQCVVD FENTPEETLK 

        70         80         90        100        110        120 
RITTGAAVSV IGTLVESKGA GQKYEIQVNK LEILGDSDAE KFPMQPKKHS LEFLRENAHL 

       130        140        150        160        170        180 
RVRTNAFGAI MRVRSVLSYA VHSYFQQKGF VYVNTPIITG ADAEGAGEMF QVTSLPLDNL 

       190        200        210        220        230        240 
PKNEEGNIDF KKDFFGKHTN LTVSGQLEGE TFAMALGQIY TFGPTFRAEN SNTSRHLAEF 

       250        260        270        280        290        300 
WMIEPEVAFN DLDDNMDLAE DFIQYVIKYA LDNCKDDLKF LEGRLLEEEK SKPQAERSEM 

       310        320        330        340        350        360 
ALLEKLNFVL ENNFKRVSYT EAIDILRDST PNKKKKFQYL INEWGADLQS EHERFLVEKH 

       370        380        390        400        410        420 
FKCPVILYDY PANIKAFYMR LNDNTEPGRE TVRAMDILFP GIGEIVGGSE REERYDVLVE 

       430        440        450        460        470        480 
KMEKLGIDKE ELYWYLDTRR FGSATHAGFG LGFERLVLFV TGMTNIRDVI PFPRTPGSAE 


F

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References

[1]"Complete sequence of Flavobacterium johnsoniae UW101."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Pitluck S., Goltsman E., Singan V., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Xie G., McBride M., Richardson P.
Submitted (APR-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 17061 / DSM 2064 / UW101.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000685 Genomic DNA. Translation: ABQ03618.1.
RefSeqYP_001192937.1. NC_009441.1.

3D structure databases

ProteinModelPortalA5FME6.
ModBaseSearch...

Protein-protein interaction databases

STRINGA5FME6.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID5090889.
GenomeReviewsGene locus Fjoh_0583 in contig CP000685_GR.
KEGGfjo:Fjoh_0583.
PATRIC21895429. VBIFlaJoh53613_0601.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0017.
HOGENOMHBG745843.
OMAAIHRFFH.
ProtClustDBPRK03932.

Family and domain databases

HAMAPMF_00534. Asn_tRNA_synth.
[Tree]
InterProIPR004364. aa-tRNA-synt_II.
IPR018150. aa-tRNA-synt_II-like.
IPR006195. aa-tRNA-synth_II.
IPR004522. Asn-tRNA-synth_IIb.
IPR002312. Asp/Asn-tRNA-synth_IIb.
IPR012340. NA-bd_OB-fold.
IPR016027. NA-bd_OB-fold-like.
IPR004365. NA-bd_OB_tRNA-helicase.
[Graphical view]
Gene3DG3DSA:2.40.50.140. OB_NA_bd_sub. 1 hit.
KOK01893.
PANTHERPTHR22594. aa-tRNA-synt_II. 1 hit.
PTHR22594:SF6. PTHR22594:SF6. 1 hit.
PfamPF00152. tRNA-synt_2. 1 hit.
PF01336. tRNA_anti. 1 hit.
[Graphical view]
PRINTSPR01042. TRNASYNTHASP.
SUPFAMSSF50249. Nucleic_acid_OB. 1 hit.
TIGRFAMsTIGR00457. AsnS. 1 hit.
PROSITEPS50862. AA_TRNA_LIGASE_II. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA5FME6_FLAJ1
AccessionPrimary (citable) accession number: A5FME6
Entry history
Integrated into UniProtKB/TrEMBL: June 12, 2007
Last sequence update: June 12, 2007
Last modified: January 25, 2012
This is version 41 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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